Evidence map›Paper›PMID 24187523›Full record

ArticleTheScientificWorldJournal2013

Preamplification procedure for the analysis of ancient DNA samples.

Stefania Del Gaudio, Alessandra Cirillo, Giovanni Di Bernardo, Umberto Galderisi, Theodoros Thanassoulas, Theodoros Pitsios, Marilena Cipollaro

Abstract read
In one paragraph

Article in TheScientificWorldJournal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Passive Sampling of Urban Runoff Solids to Capture Environmental DNA for the Detection of Rodents in Urban Spaces.Water environment research : a research publication of the Water Environment Federation · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Royal Society open science · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Stefania Del GaudioDepartment of Experimental Medicine, Section of Biotechnology and Molecular Biology "A. Cascino", Second University of Naples, Via Costantinopoli 16, 80138 Naples, Italy.
Alessandra Cirillo
Giovanni Di Bernardo
Umberto Galderisi
Theodoros Thanassoulas
Theodoros Pitsios
Marilena Cipollaro

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In ancient DNA studies the low amount of endogenous DNA represents a limiting factor that often hampers the result achievement. In this study we extracted the DNA from nine human skeletal remains of different ages found in the Byzantine cemetery of Abdera Halkidiki and in the medieval cemetery of St. Spiridion in Rhodes (Greece). Real-time quantitative polymerase chain reaction (qPCR) was used to detect in the extracts the presence of PCR inhibitors and to estimate the DNA content. As mitochondrial DNA was detected in all samples, amplification of nuclear targets, as amelogenin and the polymorphism M470V of the transmembrane conductance regulator gene, yielded positive results in one case only. In an effort to improve amplification success, we applied, for the first time in ancient DNA, a preamplification strategy based on TaqMan PreAmp Master Mix. A comparison between results obtained from nonpreamplified and preamplified samples is reported. Our data, even if preliminary, show that the TaqMan PreAmp procedure may improve the sensitivity of qPCR analysis.

Indexed as

Anthropology, PhysicalBase SequenceDNADNA FingerprintingForensic GeneticsGreeceMolecular Sequence DataReal-Time Polymerase Chain ReactionSequence Analysis, DNASpecimen HandlingDNA

Identifiers

PMID24187523
PMCPMC3800654

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.