Evidence map›Paper›PMID 24186978›Full record

ArticleGenes & development2013

Coordinate Nodal and BMP inhibition directs Baf60c-dependent cardiomyocyte commitment.

Wenqing Cai, Sonia Albini, Ke Wei, Erik Willems, Rosa M Guzzo, Masanao Tsuda, Lorenzo Giordani, Sean Spiering, Leo Kurian, Gene W Yeo and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 49 citations in OpenAlex.

  1. Pooled it
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  3. Review
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  5. Article
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  7. Article
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  10. Secretome Analysis Performed DuringFrontiers in cell and developmental biology · 2020
    Article
  11. Article
  12. Frontiers in pharmacology · 2019
    Article
  13. The TGFβ superfamily in cardiac dysfunction.Acta biochimica et biophysica Sinica · 2018
    Review
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  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Wenqing CaiSanford-Burnham Medical Research Institute, La Jolla, California 92037, USA;
Sonia Albini
Ke Wei
Erik Willems
Rosa M Guzzo
Masanao Tsuda
Lorenzo Giordani
Sean Spiering
Leo Kurian
Gene W Yeo
Pier Lorenzo Puri
Mark Mercola
Sanford Burnham Prebys Medical Discovery Institute · USUniversity of California, San Diego · USJacobs (United States) · US

Funding

Tumor Microenvironment and Cancer ImmunologyP30CA030199 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Michael Jackson · 1985 to 2026
$107.2M
Pathogenic Alterations of the 3D Epigenetic Landscape in Dystrophin-Deficient Skeletal Muscles and Reversal by Dystrophin Re-ExpressionR01AR056712 · NIAMS · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Pier Lorenzo Puri · 2009 to 2026
$7.3M
Signal-dependent switch of SWI/SNF by miRNAs & control of muscle stem cell fateR01AR052779 · NIAMS · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI PURI, PIER LORENZO · 2006 to 2015
$4.1M
San Diego Skeletal Muscle Research CenterP30AR061303 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHEN, JU · 2011 to 2015
$3.3M
Defining the messenger RNP code in the brainR01NS075449 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI YEO, EUGENE WEI-MING · 2012 to 2016
$3.0M
Myocardial Angiogenesis and CardioprotectionR01HL108176 · NHLBI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI MERCOLA, MARK · 2012 to 2015
$1.9M
Reconstruction & Modeling of Networks Involved in Cardiomyocyte DifferentiationR33HL088266 · NHLBI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI MERCOLA, MARK · 2007 to 2009
$1.0M
NCI NIH HHS P30 CA030199NCI NIH HHS P30CA030199NHLBI NIH HHS R01 HL108176NHLBI NIH HHS R01HL108176NHLBI NIH HHS R33 HL088266NHLBI NIH HHS R33HL088266NHLBI NIH HHS R37HL050502NIAMS NIH HHS P30 AR061303NIAMS NIH HHS P30AR061303NIAMS NIH HHS R01 AR052779NIAMS NIH HHS R01AR052779NIAMS NIH HHS R01 AR056712NIAMS NIH HHS R01AR056712NINDS NIH HHS R01 NS075449
6 · The paper itself

Abstract

A critical but molecularly uncharacterized step in heart formation and regeneration is the process that commits progenitor cells to differentiate into cardiomyocytes. Here, we show that the endoderm-derived dual Nodal/bone morphogenetic protein (BMP) antagonist Cerberus-1 (Cer1) in embryonic stem cell cultures orchestrates two signaling pathways that direct the SWI/SNF chromatin remodeling complex to cardiomyogenic loci in multipotent (KDR/Flk1+) progenitors, activating lineage-specific transcription. Transient inhibition of Nodal by Cer1 induces Brahma-associated factor 60c (Baf60c), one of three Baf60 variants (a, b, and c) that are mutually exclusively assembled into SWI/SNF. Blocking Nodal and BMP also induces lineage-specific transcription factors Gata4 and Tbx5, which interact with Baf60c. siRNA to Cer1, Baf60c, or the catalytic SWI/SNF subunit Brg1 prevented the developmental opening of chromatin surrounding the Nkx2.5 early cardiac enhancer and cardiomyocyte differentiation. Overexpression of Baf60c fully rescued these deficits, positioning Baf60c and SWI/SNF function downstream from Cer1. Thus, antagonism of Nodal and BMP coordinates induction of the myogenic Baf60c variant and interacting transcription factors to program the developmental opening of cardiomyocyte-specific loci in chromatin. This is the first demonstration that cues from the progenitor cell environment direct the subunit variant composition of SWI/SNF to remodel the transcriptional landscape for lineage-specific differentiation.

Indexed as

Cell DifferentiationGene Expression Regulation, DevelopmentalAnimalsBone Morphogenetic ProteinsCells, CulturedChromatin Assembly and DisassemblyChromosomal Proteins, Non-HistoneCytokinesEmbryonic Stem CellsEndodermGene Expression ProfilingHumansMiceMyocytes, CardiacNodal ProteinRNA, Small InterferingBone Morphogenetic ProteinsCER1 protein, humanChromosomal Proteins, Non-HistoneCytokinesNodal ProteinNODAL protein, humanRNA, Small InterferingSMARCD3 protein, humanTranscription FactorsBaf60ccardiogenesischromatin remodelingembryonic stem cellsFlk1/KDRNkx2-5

Identifiers

PMID24186978
PMCPMC3828519
OpenAlexW2132586693

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.