Evidence map›Paper›PMID 24185898›Full record

ArticleThe EMBO journal2013

Autophagy proteins control goblet cell function by potentiating reactive oxygen species production.

Khushbu K Patel, Hiroyuki Miyoshi, Wandy L Beatty, Richard D Head, Nicole P Malvin, Ken Cadwell, Jun-Lin Guan, Tatsuya Saitoh, Shizuo Akira, Per O Seglen and 3 more

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 166 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
166citing papers in PubMed, 3 pooled it
12.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

166 citing papers in PubMed, 3 syntheses or guidelines pooled it, 279 citations in OpenAlex.

  1. Pooled it
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  16. Biogenesis and homeostasis of mast cell lysosome related secretory granules.Frontiers in cell and developmental biology · 2025
    Review
  17. Autophagy and Bacterial infections.Autophagy reports · 2025
    Review
  18. Review
  19. Review
  20. Article

106 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Khushbu K PatelDepartment of Pathology and Immunology, Washington University School of Medicine, St Louis, MO, USA.
Hiroyuki Miyoshi
Wandy L Beatty
Richard D Head
Nicole P Malvin
Ken Cadwell
Jun-Lin Guan
Tatsuya Saitoh
Shizuo Akira
Per O Seglen
Mary C Dinauer
Herbert W Virgin
Thaddeus S Stappenbeck
Washington University in St. Louis · USOsaka International University · JPNew York University · USOslo University Hospital · NOUniversity of Michigan–Ann Arbor · US

Funding

Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
Tissue and Cell Processing CoreU19AI070489 · NIAID · WASHINGTON UNIVERSITY · PI HOLTZMAN, MICHAEL J · 2006 to 2016
$17.9M
NIAID NIH HHS R01 AI08488702NIAID NIH HHS T32 AI717231NIAID NIH HHS U19 AI070489NIDDK NIH HHS P30 DK052574NIDDK NIH HHS P30-DK52574
6 · The paper itself

Abstract

Delivery of granule contents to epithelial surfaces by secretory cells is a critical physiologic process. In the intestine, goblet cells secrete mucus that is required for homeostasis. Autophagy proteins are required for secretion in some cases, though the mechanism and cell biological basis for this requirement remain unknown. We found that in colonic goblet cells, proteins involved in initiation and elongation of autophagosomes were required for efficient mucus secretion. The autophagy protein LC3 localized to intracellular multi-vesicular vacuoles that were consistent with a fusion of autophagosomes and endosomes. Using cultured intestinal epithelial cells, we found that NADPH oxidases localized to and enhanced the formation of these LC3-positive vacuoles. Both autophagy proteins and endosome formation were required for maximal production of reactive oxygen species (ROS) derived from NADPH oxidases. Importantly, generation of ROS was critical to control mucin granule accumulation in colonic goblet cells. Thus, autophagy proteins can control secretory function through ROS, which is in part generated by LC3-positive vacuole-associated NADPH oxidases. These findings provide a novel mechanism by which autophagy proteins can control secretion.

Indexed as

AutophagyAnimalsAutophagy-Related Protein 5Cells, CulturedColonEndocytosisEpithelial CellsGoblet CellsMiceMice, Mutant StrainsMicrotubule-Associated ProteinsMucinsMutationNADPH OxidasesPhagosomesReactive Oxygen SpeciesAtg5 protein, mouseAutophagy-Related Protein 5early endosome antigen 1Map1lc3b protein, mouseMicrotubule-Associated ProteinsMucinsNADPH OxidasesReactive Oxygen SpeciesVesicular Transport Proteins

Identifiers

PMID24185898
PMCPMC3981139
OpenAlexW2140267261

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.