Evidence map›Paper›PMID 24184888›Full record

ArticlePlant signaling & behavior2013

Expression analysis reveals a role for hydrophobic or epicuticular wax signals in pre-penetration structure formation of Phakopsora pachyrhizi.

Yasuhiro Ishiga, Srinivasa Upplapapti, Kirankumar S Mysore

Open access · bronzeAbstract read
In one paragraph

Article in Plant signaling & behavior, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Genomics of Plant Disease Resistance in Legumes.Frontiers in plant science · 2019
    Review
  6. Article
  7. Article
  8. Article
  9. Fighting Asian Soybean Rust.Frontiers in plant science · 2016
    Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yasuhiro IshigaPlant Biology Division; The Samuel Roberts Noble Foundation; Ardmore, OK USA.
Srinivasa UpplapaptiPlant Biology Division; The Samuel Roberts Noble Foundation; Ardmore, OK USA.
Kirankumar S MysorePlant Biology Division; The Samuel Roberts Noble Foundation; Ardmore, OK USA.
Plant (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Asian soybean rust (ASR) caused by the fungus Phakopsora pachyrhizi is one of the most devastating foliar diseases affecting soybean production worldwide. Even though several resistance sources have been identified in soybean, they do not show resistance to all races of P. pachyrhizi. Identification of genes that confer nonhost resistance (NHR) against P. pachyrhizi in another legume species will provide an avenue to engineer soybean to have durable and broad spectrum resistance against P. pachyrhizi strains. Recently, we identified a Medicago truncatula gene, IRG1 (INHIBITOR OF RUST GERM-TUBE DIFFERENTIATION1), that when mutated inhibits the growth of P. pachyrhizi. IRG1 encodes a Cys(2)His(2) zinc finger transcription factor that controls wax-biosynthesis-related genes. The irg1 mutant shows a complete loss of abaxial epicuticular wax crystals and surface hydrophobicity, resulting in the inhibition of pre-penetration structure formation. In order to confirm the role of surface hydrophobicity in the formation of pre-penetration structures, we examined the expression profiles of P. pachyrhizi putative pre-penetration structure-development-related genes on a solid surface or a M. truncatula abaxial leaf surface. Interestingly, the expression of kinase family genes was upregulated on the hydrophobic surface and M. truncatula wild-type leaf surface, but not on the M. truncatula irg1 mutant leaf surface, suggesting that these genes play a role in P. pachyrhizi pre-penetration structure development. In addition, our results suggest that hydrophobicity on the M. truncatula leaf surface may function as a key signal to induce the P. pachyrhizi genes involved in pre-penetration structure development.

Indexed as

Gene Expression Regulation, PlantHydrophobic and Hydrophilic InteractionsBasidiomycotaGene Expression ProfilingMedicago truncatulaPlant EpidermisWaxesWaxesAsian Soybean RustEpicutuciular WAXIRG1Medicago truncatulanonhost resistancePhakopsora pachyrhizi

Identifiers

PMID24184888
PMCPMC4091598
OpenAlexW1999382859

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.