Evidence map›Paper›PMID 24184847›Full record

ReviewRNA biology2013

P-class pentatricopeptide repeat proteins are required for efficient 5' end formation of plant mitochondrial transcripts.

Stefan Binder, Katrin Stoll, Birgit Stoll

Open access · bronzeAbstract readReview
In one paragraph

Review in RNA biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Identification of a novel locusFrontiers in genetics · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Targeted cleavage ofCommunications biology · 2018
    Article
  10. Article
  11. Mitochondrial transcription in mammalian cells.Frontiers in bioscience (Landmark edition) · 2017
    Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Stefan BinderInstitut Molekulare Botanik; Universität Ulm; Ulm; Germany.
Katrin StollInstitut Molekulare Botanik; Universität Ulm; Ulm; Germany.
Birgit StollInstitut Molekulare Botanik; Universität Ulm; Ulm; Germany.
Universität Ulm · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is well recognized that flowering plants maintain a particularly broad spectrum of factors to support gene expression in mitochondria. Many of these factors are pentatricopeptide repeat (PPR) proteins that participate in virtually all processes dealing with RNA. One of these processes is the post-transcriptional generation of mature 5' termini of RNA. Several PPR proteins are required for efficient 5' maturation of mitochondrial mRNA and rRNA. These so-called RNA PROCESSING FACTORs (RPF) exclusively represent P-class PPR proteins, mainly composed of canonical PPR motifs without any extra domains. Applying the recent PPR-nucleotide recognition code, binding sites of RPF are predicted on the 5' leader sequences. The sequence-specific interaction of an RPF with one or a few RNA substrates probably directly or indirectly recruits an as-yet-unidentified endonuclease to the processing site(s). The identification and characterization of RPF is a major step toward the understanding of the role of 5' end maturation in flowering plant mitochondria.

Indexed as

RNA Processing, Post-TranscriptionalArabidopsisArabidopsis ProteinsBinding SitesElectron Transport Complex IMitochondriaPlant InfertilityRNA-Binding ProteinsRNA, MessengerRNA, MitochondrialRNA, PlantRNA StabilityArabidopsis ProteinsElectron Transport Complex Imitochondrial messenger RNANAD4 protein, ArabidopsisRNA-Binding ProteinsRNA, MessengerRNA, MitochondrialRNA, PlantRPF1 protein, ArabidopsisRPF2 protein, ArabidopsisArabidopsis thalianaendonucleolytic processingpentatricopeptide repeat proteinspost-transcriptional 5′ maturationRESTORER OF FERTILITY-like proteinsRNA PROCCESSING FACTORS

Identifiers

PMID24184847
PMCPMC3858434
OpenAlexW1979216801

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.