Evidence map›Paper›PMID 24184188›Full record

ArticleMethods (San Diego, Calif.)2014

Quantifying intracellular protein binding thermodynamics during mechanotransduction based on FRET spectroscopy.

Nur Aida Abdul Rahim, Serge Pelet, Mohammad R K Mofrad, Peter T C So, Roger D Kamm

Open access · bronzeAbstract read
In one paragraph

Article in Methods (San Diego, Calif.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Nur Aida Abdul RahimDepartment of Mechanical Engineering, Massachusetts Institute of Technology, 77 Mass Ave., Cambridge, MA 02139, United states.
Serge PeletDepartment of Biological Engineering, Massachusetts Institute of Technology, 77 Mass Ave., Cambridge, MA 02139, United States; Department of Fundamental Microbiology, University of Lausanne, Biophore Building, Room 2406, CH-1015 Lausanne, Switzerland.
Mohammad R K MofradDepartment of Bioengineering, University of California Berkeley, 306 Stanley Hall MC #1762, Berkeley, CA 94720-1762, United States.
Peter T C SoDepartment of Mechanical Engineering, Massachusetts Institute of Technology, 77 Mass Ave., Cambridge, MA 02139, United states; Department of Biological Engineering, Massachusetts Institute of Technology, 77 Mass Ave., Cambridge, MA 02139, United States; Laser Biomedical Research Center, A NIH NIBIB Research Resource, Massachusetts Institute of Technology, 77 Mass Ave., Cambridge, MA 02139, United States. Electronic address: ptso@mit.edu.
Roger D KammDepartment of Mechanical Engineering, Massachusetts Institute of Technology, 77 Mass Ave., Cambridge, MA 02139, United states; Department of Biological Engineering, Massachusetts Institute of Technology, 77 Mass Ave., Cambridge, MA 02139, United States.
Massachusetts Institute of Technology · USUniversity of California, Berkeley · USUniversity of Lausanne · CH

Funding

Wide-Field Short-Wave Infrared (SWIR) multiphoton (MP) tissue imagingP41EB015871 · NIBIB · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI SO, PETER T. · 2012 to 2021
$11.3M
Regenerative Healing Using ECM Based ScaffoldsR01NS051320 · NINDS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI YANNAS, IOANNIS V · 2006 to 2009
$1.6M
High Throughput Manufacturing for Three-Dimensional Microfluidic DevicesR44EB012415 · NIBIB · FEMTOFAB, INC. · PI JANG, YUN-HO · 2011 to 2013
$849k
NIBIB NIH HHS 4R44EB012415-02NIBIB NIH HHS 9P41EB015871-26A1NIBIB NIH HHS P41 EB015871NIBIB NIH HHS R44 EB012415NINDS NIH HHS 5 R01 NS051320NINDS NIH HHS R01 NS051320PHS HHS R01-EX017656
6 · The paper itself

Abstract

Mechanical force modulates myriad cellular functions including migration, alignment, proliferation, and gene transcription. Mechanotransduction, the transmission of mechanical forces and its translation into biochemical signals, may be mediated by force induced protein conformation changes, subsequently modulating protein signaling. For the paxillin and focal adhesion kinase interaction, we demonstrate that force-induced changes in protein complex conformation, dissociation constant, and binding Gibbs free energy can be quantified by lifetime-resolved fluorescence energy transfer microscopy combined with intensity imaging calibrated by fluorescence correlation spectroscopy. Comparison with in vitro data shows that this interaction is allosteric in vivo. Further, spatially resolved imaging and inhibitor assays show that this protein interaction and its mechano-sensitivity are equal in the cytosol and in the focal adhesions complexes indicating that the mechano-sensitivity of this interaction must be mediated by soluble factors but not based on protein tyrosine phosphorylation.

Indexed as

Mechanotransduction, CellularAlgorithmsAllosteric RegulationAnimalsCalibrationCattleCells, CulturedCytosolEndothelial CellsFluorescence Resonance Energy TransferFocal Adhesion Kinase 1PaxillinProtein BindingRecombinant Fusion ProteinsSingle-Cell AnalysisSpectrometry, FluorescenceFocal Adhesion Kinase 1PaxillinRecombinant Fusion ProteinsFCSFLIMFocal adhesion kinaseFRETMechanotransductionPaxillin

Identifiers

PMID24184188
PMCPMC4094350
OpenAlexW2117278458

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.