Evidence map›Paper›PMID 24183571›Full record

ArticleStructure (London, England : 1993)2013

Dynamic recognition of the mRNA cap by Saccharomyces cerevisiae eIF4E.

Seán E O'Leary, Alexey Petrov, Jin Chen, Joseph D Puglisi

Open access · bronzeAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Review
  3. Dynamics and Regulation of mRNA Cap Recognition by Human eIF4F.bioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. The mechanism of mRNA activation.bioRxiv : the preprint server for biology · 2023
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Protein Synthesis Initiation in Eukaryotic Cells.Cold Spring Harbor perspectives in biology · 2018
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Seán E O'LearyDepartment of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Alexey Petrov
Jin Chen
Joseph D Puglisi
Stanford University · US

Funding

Single molecule translational profilingR01GM099687 · NIGMS · STANFORD UNIVERSITY · PI PUGLISI, JOSEPH D · 2011 to 2015
$4.3M
Eukaryotic Translational Initiation and its RegulationR01GM073999 · NIGMS · STANFORD UNIVERSITY · PI PUGLISI, JOSEPH D · 2007 to 2010
$1.2M
NIGMS NIH HHS R01 GM073999NIGMS NIH HHS R01 GM099687
6 · The paper itself

Abstract

Recognition of the mRNA 5' m⁷G(5')ppp(5')N cap is key to translation initiation for most eukaryotic mRNAs. The cap is bound by the eIF4F complex, consisting of a cap-binding protein (eIF4E), a "scaffold" protein (eIF4G), and an RNA helicase (eIF4A). As a central early step in initiation, regulation of eIF4F is crucial for cellular viability. Although the structure and function of eIF4E have been defined, a dynamic mechanistic picture of its activity at the molecular level in the eIF4F·mRNA complex is still unavailable. Here, using single-molecule fluorescence, we measured the effects of Saccharomyces cerevisiae eIF4F factors, mRNA secondary structure, and the poly(A)-binding protein Pab1p on eIF4E-mRNA binding dynamics. Our data provide an integrated picture of how eIF4G and mRNA structure modulate eIF4E-mRNA interaction, and uncover an eIF4G- and poly(A)-independent activity of poly(A)-binding protein that prolongs the eIF4E·mRNA complex lifetime.

Indexed as

CarbocyaninesEukaryotic Initiation Factor-4EEukaryotic Initiation Factor-4GExoribonucleasesFluorescence Resonance Energy TransferFluorescent DyesNucleic Acid ConformationPeptide Chain Initiation, TranslationalPoly APoly(A)-Binding ProteinsRNA CapsRNA, FungalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCarbocyaninescyanine dye 5Eukaryotic Initiation Factor-4EEukaryotic Initiation Factor-4GExoribonucleasesFluorescent Dyespab1 protein, S cerevisiaePAN3 protein, S cerevisiaePoly APoly(A)-Binding ProteinsRNA CapsRNA, FungalSaccharomyces cerevisiae Proteins

Identifiers

PMID24183571
PMCPMC3878992
OpenAlexW2149447949

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.