Evidence map›Paper›PMID 24179135›Full record

ArticleGenome biology and evolution2013

Parallel recruitment of multiple genes into c4 photosynthesis.

Pascal-Antoine Christin, Susanna F Boxall, Richard Gregory, Erika J Edwards, James Hartwell, Colin P Osborne

Abstract read
In one paragraph

Article in Genome biology and evolution, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
  2. Article
  3. Evolution of gene regulatory network of CPlant communications · 2023
    Article
  4. Article
  5. Article
  6. Evolution of an intermediate CPhotosynthesis research · 2022
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. What Matters for CFrontiers in plant science · 2020
    Article
  13. Evolutionary Convergence of CFrontiers in plant science · 2020
    Article
  14. Article
  15. Kinetic Modifications of CFrontiers in plant science · 2020
    Article
  16. Article
  17. Article
  18. The genome of broomcorn millet.Nature communications · 2019
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Pascal-Antoine ChristinDepartment of Animal and Plant Sciences, University of Sheffield, United Kingdom.
Susanna F Boxall
Richard Gregory
Erika J Edwards
James Hartwell
Colin P Osborne

Funding

Biotechnology and Biological Sciences Research Council BB/F009313/1
6 · The paper itself

Abstract

During the diversification of living organisms, novel adaptive traits usually evolve through the co-option of preexisting genes. However, most enzymes are encoded by gene families, whose members vary in their expression and catalytic properties. Each may therefore differ in its suitability for recruitment into a novel function. In this work, we test for the presence of such a gene recruitment bias using the example of C4 photosynthesis, a complex trait that evolved recurrently in flowering plants as a response to atmospheric CO2 depletion. We combined the analysis of complete nuclear genomes and high-throughput transcriptome data for three grass species that evolved the C4 trait independently. For five of the seven enzymes analyzed, the same gene lineage was recruited across the independent C4 origins, despite the existence of multiple copies. The analysis of a closely related C3 grass confirmed that C4 expression patterns were not present in the C3 ancestors but were acquired during the evolutionary transition to C4 photosynthesis. The significant bias in gene recruitment indicates that some genes are more suitable for a novel function, probably because the mutations they accumulated brought them closer to the characteristics required for the new function.

Indexed as

Evolution, MolecularGenes, PlantAirCarbon DioxidePhotosynthesisPlant ProteinsPoaceaeTranscriptomeCarbon DioxidePlant Proteinscomplex traitsco-optionevolutionary noveltygene familiesphylogenomics

Identifiers

PMID24179135
PMCPMC3845648

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.