Evidence map›Paper›PMID 24178029›Full record

ArticleNucleic acids research2014

Stimulation of ribosomal frameshifting by RNA G-quadruplex structures.

Chien-Hung Yu, Marie-Paule Teulade-Fichou, René C L Olsthoorn

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 77 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Chien-Hung YuDepartment of Molecular Genetics, Leiden Institute of Chemistry, Leiden University, PO Box 9502, Leiden, The Netherlands and Institut Curie, UMR 176-CNRS, Bât 110, Université Paris-Sud, 91405 Orsay, France.
Marie-Paule Teulade-Fichou
René C L Olsthoorn
Leiden University · NLUniversity of Applied Sciences Leiden · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Guanine-rich sequences can fold into four-stranded structures of stacked guanine-tetrads, so-called G-quadruplexes (G4). These unique motifs have been extensively studied on the DNA level; however, exploration of the biological roles of G4s at the RNA level is just emerging. Here we show that G4 RNA when introduced within coding regions are capable of stimulating -1 ribosomal frameshifting (-1 FS) in vitro and in cultured cells. Systematic manipulation of the loop length between each G-tract revealed that the -1 FS efficiency positively correlates with G4 stability. Addition of a G4-stabilizing ligand, PhenDC3, resulted in higher -1 FS. Further, we demonstrated that the G4s can stimulate +1 FS and stop codon readthrough as well. These results suggest a potentially novel translational gene regulation mechanism mediated by G4 RNA.

Indexed as

Frameshifting, RibosomalG-Quadruplexes5' Untranslated RegionsCodon, TerminatorLigandsRNAThermodynamics5' Untranslated RegionsCodon, TerminatorLigandsRNA

Identifiers

PMID24178029
PMCPMC3919603
OpenAlexW2022092530

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.