ArticleNucleic acids research2014
SubtiWiki-a database for the model organism Bacillus subtilis that links pathway, interaction and expression information.
Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
42 citing papers in PubMed, 80 citations in OpenAlex.
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- Advances in genome-scale metabolic modeling of Bacillus subtilis.Biotechnology letters · 2026Review
- Integrative Metabolomics and Proteomics Allow the Global Intracellular Characterization ofJournal of proteome research · 2024Article
- High-throughput functional genomics: A (myco)bacterial perspective.Molecular microbiology · 2023Review
- Identification of ulcerative colitis-specific immune cell signatures from public single-cell RNA-seq data.Genes & genomics · 2023Article
- Gradients in gene essentiality reshape antibacterial research.FEMS microbiology reviews · 2022Review
- The current state of SubtiWiki, the database for the model organism Bacillus subtilis.Nucleic acids research · 2022Article
- SynWiki: Functional annotation of the first artificial organism Mycoplasma mycoides JCVI-syn3A.Protein science : a publication of the Protein Society · 2022Article
- Quasi-essentiality of RNase Y in Bacillus subtilis is caused by its critical role in the control of mRNA homeostasis.Nucleic acids research · 2021Article
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- Kinetic Modeling and Meta-Analysis of theMicroorganisms · 2021Article
- OutPredict: multiple datasets can improve prediction of expression and inference of causality.Scientific reports · 2020Article
- Bacillus subtilis Regulators MntR and Zur Participate in Redox Cycling, Antibiotic Sensitivity, and Cell Wall Plasticity.Journal of bacteriology · 2020Article
- Reconstruction and inference of the Lactococcus lactis MG1363 gene co-expression network.PloS one · 2019Article
- Genexpi: a toolset for identifying regulons and validating gene regulatory networks using time-course expression data.BMC bioinformatics · 2018Article
- Dynamic sporulation gene co-expression networks for Bacillus subtilis 168 and the food-borne isolate Bacillus amyloliquefaciens: a transcriptomic model.Microbial genomics · 2018Article
- Construction and Analysis of Two Genome-Scale Deletion Libraries for Bacillus subtilis.Cell systems · 2017Article
- Genome and transcriptome analysis of surfactin biosynthesis in Bacillus amyloliquefaciens MT45.Scientific reports · 2017Article
- Fused Regression for Multi-source Gene Regulatory Network Inference.PLoS computational biology · 2016Article
Corrections and comments
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Genome annotation and access to information from large-scale experimental approaches at the genome level are essential to improve our understanding of living cells and organisms. This is even more the case for model organisms that are the basis to study pathogens and technologically important species. We have generated SubtiWiki, a database for the Gram-positive model bacterium Bacillus subtilis (http://subtiwiki.uni-goettingen.de/). In addition to the established companion modules of SubtiWiki, SubtiPathways and SubtInteract, we have now created SubtiExpress, a third module, to visualize genome scale transcription data that are of unprecedented quality and density. Today, SubtiWiki is one of the most complete collections of knowledge on a living organism in one single resource.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.