ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik1994
Sequence-tagged sites (STSs) as standard landmarkers in the rice genome.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 1994. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed.
- Development of a genome-wide InDel marker set for allele discrimination between rice (Oryza sativa) and the other seven AA-genome Oryza species.Scientific reports · 2021Article
- Current status on mapping of genes for resistance to leaf- and neck-blast disease in rice.3 Biotech · 2019Review
- Rice molecular breeding laboratories in the genomics era: Current status and future considerations.International journal of plant genomics · 2008Article
- Structural and functional analysis of rice genome.Journal of genetics · 2004Review
- Sequencing of cDNA clones from the genetic map of tomato (Lycopersicon esculentum).Genome research · 1998Article
- Rice molecular genetic map using RFLPs and its applications.Plant molecular biology · 1997Review
- Microsatellite DNA markers for rice chromosomes.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1996Article
- Aroma in rice: genetic analysis of a quantitative trait.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1996Article
- Development of pre-isogenic lines for rice blast-resistance by marker-aided selection from a recombinant inbred population.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1996Article
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Authors and funding
11 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Generating sequence-tagged sites (STSs) is a prerequisite to convert a genetic map to a physical map. With the help of sequence information from these STSs one can also isolate specific genes. For these purposes, we have designed PCR primer sets, of 20 bases each, by reference to sequences of restriction fragment length polymorphism (RFLP) landmarkers consisting of rice genomic clones. These markers were evenly distributed over the 12 chromosomes and were shown to be single copy by Southern-blot analysis. With improved PCR protocols, 63 standard STS landmarkers in the rice genome were generated. Similarity searches of all partial sequences of RFLP landmarkers by the FASTA algorithm showed that 2 of the 63 RFLP landmarkers, G357 and G385, contained part of the ORFs of aspartate aminotransferase and protein kinase, respectively.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.