Evidence map›Paper›PMID 24173912›Full record

ArticlePlant molecular biology2014

CEBiP is the major chitin oligomer-binding protein in rice and plays a main role in the perception of chitin oligomers.

Yusuke Kouzai, Keisuke Nakajima, Masahiro Hayafune, Kenjirou Ozawa, Hanae Kaku, Naoto Shibuya, Eiichi Minami, Yoko Nishizawa

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Article in Plant molecular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
12.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 99 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Isolation ofInternational journal of molecular sciences · 2023
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  7. Advances in Fungal Elicitor-Triggered Plant Immunity.International journal of molecular sciences · 2022
    Review
  8. Article
  9. Time-series transcriptome ofFrontiers in plant science · 2022
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. APlant physiology · 2019
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yusuke KouzaiGenetically Modified Organism Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki, 305-8602, Japan.
Keisuke Nakajima
Masahiro Hayafune
Kenjirou Ozawa
Hanae Kaku
Naoto Shibuya
Eiichi Minami
Yoko Nishizawa
Institute of Agrobiological Sciences · JPMeiji University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CEBiP, a plasma membrane-localized glycoprotein of rice, directly binds with chitin elicitors (CE), and has been identified as a receptor for CE by using CEBiP-RNAi rice cells. To further clarify the function of CEBiP, we produced CEBiP-disrupted rice plants by applying an efficient Agrobacterium-mediated gene-targeting system based on homologous recombination, which has recently been developed for rice. Homologous recombination occurred at the CEBiP locus in ~0.5 % of the positive/negative selected calli. In the self-pollinated next generation, it was confirmed that the first exon of CEBiP was replaced with the hygromycin selection cassette as designed, and that the expression of CEBiP was completely deficient in homozygous cebip lines. Affinity-labeling analysis using biotinylated N-acetylchitooctaose demonstrated that CEBiP is the major CE-binding protein in rice cultured cells and leaves, which was consistent with the result that the response to CE in cebip cells was greatly diminished. Nevertheless, we observed a significant decrease in disease resistance against Magnaporthe oryzae, the causal agent of rice blast disease, only when the cebip leaf sheaths were inoculated with a weakly virulent strain, suggesting that CE perception during the infection process of M. oryzae is limited. The response to peptidoglycan and lipopolysaccharides in cebip cells was not affected, strongly suggesting that CEBiP is a CE-specific receptor.

Indexed as

Base SequenceChitinElectrophoresis, Polyacrylamide GelGene Expression Regulation, PlantGenetic Complementation TestHost-Pathogen InteractionsHydrogen PeroxideMagnaportheMutationOligosaccharidesOryzaPeptidoglycanPlant DiseasesPlant ProteinsPlants, Genetically ModifiedProtein BindingChitinHydrogen PeroxideN-acetylchitoheptaoseOligosaccharidesPeptidoglycanPlant ProteinsReceptors, Pattern Recognition

Identifiers

PMID24173912
OpenAlexW2091759802

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.