Evidence map›Paper›PMID 24173219›Full record

ArticleJournal of virology2014

Replication of oral BK virus in human salivary gland cells.

Raquel Burger-Calderon, Victoria Madden, Ryan A Hallett, Aaron D Gingerich, Volker Nickeleit, Jennifer Webster-Cyriaque

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Salivary Glands and Viral Pathogenesis.Journal of dental research · 2024
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Human polyomaviruses and cancer: an overview.Clinics (Sao Paulo, Brazil) · 2018
    Review
  13. Article
  14. Article
  15. Oral manifestations of systemic disease.British dental journal · 2017
    Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Raquel Burger-CalderonMicrobiology and Immunology Department, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Victoria Madden
Ryan A Hallett
Aaron D Gingerich
Volker Nickeleit
Jennifer Webster-Cyriaque
University of North Carolina at Chapel Hill · US

Funding

Molecular Biology of Viral Diseases Predoctoral Training GrantT32AI007419 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Mark T Heise, CARY A MOODY · 1993 to 2026
$4.7M
BK Virus: Its role in BLL CausationR21DE023046 · NIDCR · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WEBSTER-CYRIAQUE, JENNIFER Y · 2012 to 2013
$398k
NIAID NIH HHS T32 AI007419NIDCR NIH HHS R21 DE023046NIDCR NIH HHS R21DE023046PHS HHS 1-H97-HA07511PHS HHS U01A168636-05
6 · The paper itself

Abstract

BK polyomavirus (BKPyV) is the most common viral pathogen among allograft patients. Increasing evidence links BKPyV to the human oral compartment and to HIV-associated salivary gland disease (HIVSGD). To date, few studies have analyzed orally derived BKPyV. This study aimed to characterize BKPyV isolated from throat wash (TW) samples from HIVSGD patients. The replication potential of HIVSGD-derived clinical isolates HIVSGD-1 and HIVSGD-2, both containing the noncoding control region (NCCR) architecture OPQPQQS, were assessed and compared to urine-derived virus. The BKPyV isolates displayed significant variation in replication potential. Whole-genome alignment of the two isolates revealed three nucleotide differences that were analyzed for a potential effect on the viral life cycle. Analysis revealed a negligible difference in NCCR promoter activity despite sequence variation and emphasized the importance of functional T antigen (Tag) for efficient replication. HIVSGD-1 encoded full-length Tag, underwent productive infection in both human salivary gland cells and kidney cells, and expressed viral DNA and Tag protein. Additionally, HIVSGD-1 generated DNase-resistant particles and by far surpassed the replication potential of the kidney-derived isolate in HSG cells. HIVSGD-2 encoded a truncated form of Tag and replicated much less efficiently. Quantitation of infectious virus, via the fluorescent forming unit assay, suggested that HIVSGD BKPyV had preferential tropism for salivary gland cells over kidney cells. Similarly, the results suggested that kidney-derived virus had preferential tropism for kidney cells over salivary gland cells. Evidence of HIVSGD-derived BKPyV oral tropism and adept viral replication in human salivary gland cells corroborated the potential link between HIVSGD pathogenesis and BKPyV.

Indexed as

Virus ReplicationAmino Acid SequenceAnimalsBase SequenceBK VirusBlotting, SouthernChlorocebus aethiopsDNA PrimersDNA, ViralHumansMicroscopy, Electron, TransmissionMolecular Sequence DataPromoter Regions, GeneticSalivary GlandsSequence Homology, Amino AcidSequence Homology, Nucleic AcidDNA PrimersDNA, Viral

Identifiers

PMID24173219
PMCPMC3911688
OpenAlexW2108818578

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.