Evidence map›Paper›PMID 24173072›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik1995

RAPD linkage mapping in a longleaf pine x slash pine F1 family.

T L Kubisiak, C D Nelson, W L Nance, M Stine

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
8.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
  2. Article
  3. Quantitative trait loci and candidate gene mapping of aluminum tolerance in diploid alfalfa.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2007
    Article
  4. Article
  5. Construction of an integrated map of rose with AFLP, SSR, PK, RGA, RFLP, SCAR and morphological markers.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2005
    Article
  6. Genetic maps for Pinus elliottii var. elliottii and P. caribaea var. hondurensis using AFLP and microsatellite markers.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2003
    Article
  7. A first linkage map of olive (Olea europaea L.) cultivars using RAPD, AFLP, RFLP and SSR markers.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2003
    Article
  8. Nearly complete genetic maps of Pinus sylvestris L. (Scots pine) constructed by AFLP marker analysis in a full-sib family.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2003
    Article
  9. Theobroma cacao L.: a genetic linkage map and quantitative trait loci analysis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1996
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

T L KubisiakLouisiana Agricultural Experiment Station, Louisiana State University Agricultural Center, School of Forestry, Wildlife, and Fisheries, 70803, Baton Rouge, Louisiana, USA.
C D Nelson
W L Nance
M Stine
Louisiana State University Agricultural Center · USSouthern Research Station · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Random amplified polymorphic DNAs (RAPDs) were used to construct linkage maps of the parent of a longleaf pine (Pinus palustris Mill.) slash pine (Pinus elliottii Englm.) F1 family. A total of 247 segregating loci [233 (1∶1), 14 (3∶1)] and 87 polymorphic (between parents), but non-segregating, loci were identified. The 233 loci segregating 1∶1 (testcross configuration) were used to construct parent-specific linkage maps, 132 for the longleaf-pine parent and 101 for the slash-pine parent. The resulting linkage maps consisted of 122 marker loci in 18 groups (three or more loci) and three pairs (1367.5 cM) for longleaf pine, and 91 marker loci in 13 groups and six pairs for slash pine (952.9 cM). Genome size estimates based on two-point linkage data ranged from 2348 to 2392 cM for longleaf pine, and from 2292 to 2372 cM for slash pine. Linkage of 3∶1 loci to testcross loci in each of the parental maps was used to infer further linkages within maps, as well as potentially homologous counterparts between maps. Three of the longleaf-pine linkage groups appear to be potentially homologous counterparts to four different slash-pine linkage groups. The number of heterozygous loci (previously testcross in parents) per F1 individual, ranged from 96 to 130. With the 87 polymorphic, but non-segregating, loci that should also be heterozygous in the F1 progeny, a maximum of 183-217 heterozygous loci could be available for mapping early height growth (EHG) loci and for applying genomic selection in backcross populations.

Identifiers

PMID24173072
OpenAlexW2065150723

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.