Evidence map›Paper›PMID 24172921›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik1995

High-resolution flow karyotyping and chromosome sorting in Vicia faba lines with standard and reconstructed karyotypes.

J Doležel, S Lucretti

Abstract read
PubMed Publisher
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 50 citations in OpenAlex.

  1. Genomic regions associated with chocolate spot (Molecular breeding : new strategies in plant improvement · 2022
    Article
  2. Flow karyotyping of wheat-Frontiers in plant science · 2022
    Article
  3. Chromosome analysis and sorting.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2021
    Review
  4. Article
  5. Article
  6. Chromosomes in the flow to simplify genome analysis.Functional & integrative genomics · 2012
    Review
  7. Article
  8. Article
  9. Chromosome-based genomics in the cereals.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2007
    Review
  10. Flow cytogenetics and plant genome mapping.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2004
    Review
  11. Flow karyotypes and chromosomal DNA contents of genus Triticum species and rye (Secale cereale).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2004
    Article
  12. Chromosome sorting and PCR-based physical mapping in pea (Pisum sativum L.).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2002
    Article
  13. Flow karyotyping and sorting of mitotic chromosomes of barley (Hordeum vulgare L.).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 1999
    Article
  14. Construction of chromosome-specific DNA libraries covering the whole genome of field bean (Vicia faba L.).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 1996
    Article
  15. Preparation of pea (Pisum sativum L.) chromosome and nucleus suspensions from single root tips.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1996
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 3 countries.

J DoleželInstitute of Experimental Botany, De Montfort University Norman Borlang Centre for Plant Science, Sokolovská 6, CZ-77200, Olomouc, Czech Republic.
S Lucretti
Czech Academy of Sciences, Institute of Experimental Botany · CZNational Agency for New Technologies, Energy and Sustainable Economic Development · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Flow cytometric analysis has been performed on chromosomes isolated from formaldehyde-fixed root tips in a Vicia faba (2n = 12) line with a standard (wild-type) karyotype and in six V. faba translocation lines with reconstructed karyotypes. The resolution of individual chromosome types on histograms of chromosome fluorescence intensity (flow karyotypes) depended on the type of fluorochrome used for chromosome staining. The highest degree of resolution was achieved with 4',6-diamidino-2-phenylindole (DAPI). The lower resolution obtained after staining with mithramycin A (MIT) and propidium iodide (PI) was probably due to the sensitivity of these stains to changes in chromatin structure induced by formaldehyde fixation. After the staining with DAPI, only 1 chromosome type could be discriminated in the line with a standard karyotype. In the translocation lines, the number of chromosome types resolved on flow karyotypes ranged from 2 in the G and the ACB lines to all (6) chromosome types in the EFK and EF lines. Refined flow karyotyping permitted the sorting of a total of 15 different chromosome types from five of the translocation lines. It is expected that flow sorting of chromosomes from reconstructed karyotypes will become a powerful tool in the study of nuclear genome organisation in V. faba.

Identifiers

PMID24172921
OpenAlexW2018692039

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.