Evidence map›Paper›PMID 24171105›Full record

ArticleeLife2013

Structure and function of the Smoothened extracellular domain in vertebrate Hedgehog signaling.

Sigrid Nachtergaele, Daniel M Whalen, Laurel K Mydock, Zhonghua Zhao, Tomas Malinauskas, Kathiresan Krishnan, Philip W Ingham, Douglas F Covey, Christian Siebold, Rajat Rohatgi

Open access · goldAbstract read
In one paragraph

Article in eLife, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed, 164 citations in OpenAlex.

  1. Article
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  8. Article
  9. Fully activated structure of the sterol-bound Smoothened GPCR-Gi protein complex.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. Article
  11. Cellular and molecular mechanisms of Hedgehog signalling.Nature reviews. Molecular cell biology · 2023
    Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. The Intimate Connection Between Lipids and Hedgehog Signaling.Frontiers in cell and developmental biology · 2022
    Review

36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Sigrid NachtergaeleDepartment of Biochemistry , Stanford University School of Medicine , Stanford , United States.
Daniel M Whalen
Laurel K Mydock
Zhonghua Zhao
Tomas Malinauskas
Kathiresan Krishnan
Philip W Ingham
Douglas F Covey
Christian Siebold
Rajat Rohatgi
Washington University in St. Louis · USCentre for Human Genetics · GBStanford University · USInstitute of Molecular and Cell Biology · SGNanyang Technological University · SGUniversity of Oxford · GB

Funding

Washington University Nutrition Obesity Research CenterP30DK056341 · NIDDK · WASHINGTON UNIVERSITY · PI Brian N Finck · 1999 to 2026
$30.2M
WU P&FP30DK020579 · NIDDK · WASHINGTON UNIVERSITY · PI Jennifer Lynn Powers Carson · 2013 to 2026
$27.1M
TRANSGENICS COREP60DK020579 · NIDDK · WASHINGTON UNIVERSITY · PI SCHAFFER, JEAN E. · 1986 to 2012
$25.2M
STRUCTURE/ACTIVITY STUDIES OF NEUROSTEROID ANALOGUESP01GM047969 · NIGMS · WASHINGTON UNIVERSITY · PI COVEY, DOUGLAS F · 1992 to 2011
$18.7M
YOGA LIFESTYLE INTERVENTION REDUCES BLOOD PRESSURE IN HIV-INFECTED ADULTSP41RR000954 · NCRR · WASHINGTON UNIVERSITY · PI GROSS, MICHAEL L · 1985 to 2011
$16.0M
Post-lysosomal cholesterol trafficking networksR01HL067773 · NHLBI · WASHINGTON UNIVERSITY · PI SCHAFFER, JEAN E. · 2002 to 2021
$6.3M
CARDIOVASCULAR SYSTEM--FUNCTION/REGULATION/PHARMACOLOGYT32HL007275 · NHLBI · WASHINGTON UNIVERSITY · PI NERBONNE, JEANNE M. · 1985 to 2013
$6.0M
Biochemical Mechanisms of Hedgehog SignalingR00CA129174 · NCI · STANFORD UNIVERSITY · PI ROHATGI, RAJAT · 2009 to 2011
$1.0M
Cancer Research UK 14414Cancer Research UK C20724/A14414NCI NIH HHS R00 CA129174NCRR NIH HHS P41 RR000954NHLBI NIH HHS R01 HL067773NHLBI NIH HHS T32 HL007275NIDDK NIH HHS P30 DK020579NIDDK NIH HHS P30 DK056341NIDDK NIH HHS P60 DK020579NIGMS NIH HHS P01 GM047969Wellcome Trust 090532Wellcome Trust WT/082301/Z/07/Z
6 · The paper itself

Abstract

The Hedgehog (Hh) signal is transduced across the membrane by the heptahelical protein Smoothened (Smo), a developmental regulator, oncoprotein and drug target in oncology. We present the 2.3 Å crystal structure of the extracellular cysteine rich domain (CRD) of vertebrate Smo and show that it binds to oxysterols, endogenous lipids that activate Hh signaling. The oxysterol-binding groove in the Smo CRD is analogous to that used by Frizzled 8 to bind to the palmitoleyl group of Wnt ligands and to similar pockets used by other Frizzled-like CRDs to bind hydrophobic ligands. The CRD is required for signaling in response to native Hh ligands, showing that it is an important regulatory module for Smo activation. Indeed, targeting of the Smo CRD by oxysterol-inspired small molecules can block signaling by all known classes of Hh activators and by clinically relevant Smo mutants. DOI:http://dx.doi.org/10.7554/eLife.01340.001.

Indexed as

AnimalsBinding SitesCrystallography, X-RayEmbryo, NonmammalianEscherichia coliGene Expression Regulation, DevelopmentalHedgehog ProteinsLigandsMiceModels, MolecularProtein BindingProtein Structure, SecondaryProtein Structure, TertiaryReceptors, G-Protein-CoupledRecombinant ProteinsSignal TransductionHedgehog ProteinsLigandsReceptors, G-Protein-CoupledRecombinant ProteinsSmoothened Receptorsmo protein, zebrafishSterolsZebrafish Proteinscysteine rich domainHedgehog signalingoxysterolsmoothenedZebrafish

Identifiers

PMID24171105
PMCPMC3809587
OpenAlexW2131830004

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.