Evidence map›Paper›PMID 24167300›Full record

ArticleProtein engineering, design & selection : PEDS2013

Characterization of the Staphylococcal enterotoxin A: Vβ receptor interaction using human receptor fragments engineered for high affinity.

P Sharma, S Postel, E J Sundberg, D M Kranz

Open access · bronzeAbstract read
In one paragraph

Article in Protein engineering, design & selection : PEDS, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

P SharmaDepartment of Biochemistry, University of Illinois, Urbana, IL 61801, USA.
S Postel
E J Sundberg
D M Kranz
University of Maryland, Baltimore · USUniversity of Illinois Urbana-Champaign · USUrbana University · US

Funding

Vaccines and Therapies Against BotulismU54AI057153 · NIAID · UNIVERSITY OF CHICAGO · PI SCHNEEWIND, OLAF · 2003 to 2013
$87.6M
Development of Superantigen AntagonistsR01AI065690 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI SUNDBERG, ERIC JOHN · 2008 to 2011
$1.8M
Ultrasensitive Detection Probes for Staphylococcus aureus EnterotoxinsR43AI102432 · NIAID · IMMUVEN, INC. · PI CHERVIN, ADAM, KRANZ, DAVID M. · 2012 to 2012
$297k
NIAID NIH HHS R01 AI065690NIAID NIH HHS R43 AI102432NIAID NIH HHS U54 AI57153
6 · The paper itself

Abstract

Staphylococcal food poisoning is a gastrointestinal disorder caused by the consumption of food containing Staphylococcal enterotoxins. Staphylococcal enterotoxin A (SEA) is the most common enterotoxin recovered from food poisoning outbreaks in the USA. In addition to its enteric activity, SEA also acts as a potent superantigen through stimulation of T cells, although less is known about its interactions than the superantigens SEB, SEC and toxic shock syndrome toxin-1. To understand more about SEA:receptor interactions, and to develop toxin-detection systems for use in food testing, we engineered various SEA-binding receptor mutants. The extracellular domain of the receptor, a variable region of the beta chain (Vβ22) of the T-cell receptor, was engineered for stability as a soluble protein and for high affinity, using yeast-display technology. The highest affinity mutant was shown to bind SEA with a Kd value of 4 nM. This was a 25 000-fold improvement in affinity compared with the wild-type receptor, which bound to SEA with low affinity (Kd value of 100 µM), similar to other superantigen:Vβ interactions. The SEA:Vβ interface was centered around residues within the complementarity determining region 2 loop. The engineered receptor was specific for SEA, in that it did not bind to two other closely related enterotoxins SEE or SED, providing information on the SEA residues possibly involved in the interaction. The specificity and affinity of these high-affinity Vβ proteins also provide useful agents for the design of more sensitive and specific systems for SEA detection.

Indexed as

Amino Acid SequenceCell Surface Display TechniquesEnterotoxinsHumansMolecular Sequence DataMutagenesis, Site-DirectedProtein BindingProtein StabilityReceptors, Antigen, T-Cell, alpha-betaRecombinant ProteinsSensitivity and SpecificitySequence Alignmententerotoxin A, StaphylococcalEnterotoxinsReceptors, Antigen, T-Cell, alpha-betaRecombinant Proteinsdirected evolutionfood poisoningStaphylococcal enterotoxin A (SEA)yeast display

Identifiers

PMID24167300
PMCPMC3836440
OpenAlexW2096101326

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.