Evidence map›Paper›PMID 24166928›Full record

ArticleMicrobiologyOpen2013

The Yersinia enterocolitica Ysa type III secretion system is expressed during infections both in vitro and in vivo.

Zachary W Bent, Steven S Branda, Glenn M Young

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Zachary W BentMicrobiology Graduate Group, University of California, Davis, CA; Systems Biology, Sandia National Laboratories, Livermore, CA.
Steven S Branda
Glenn M Young
Sandia National Laboratories California · USUniversity of California, Davis · US

Funding

Animal Models of Infectious Diseases Training ProgramT32AI060555 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI MCSORLEY, STEPHEN J · 2004 to 2025
$3.3M
NK cell and interferon gamma deficiency in infant susceptibility to pertussisR21AI156042 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI CARBONETTI, NICHOLAS H · 2021 to 2022
$425k
Gene Methylation Targets for Prostate Cancer Prevention by Early Soy ExposureR21CA156042 · NCI · UNIVERSITY OF CINCINNATI · PI TAM, NGAI CHUNG NEVILLE · 2011 to 2012
$376k
NCI NIH HHS R21 CA156042NIAID NIH HHS R21 AI156042NIAID NIH HHS T32 AI060555NIAID NIH HHS T32 AI60555
6 · The paper itself

Abstract

Yersinia enterocolitica biovar 1B maintains two type III secretion systems (T3SS) that are involved in pathogenesis, the plasmid encoded Ysc T3SS and the chromosomally encoded Ysa T3SS. In vitro, the Ysa T3SS has been shown to be expressed only at 26°C in a high-nutrient medium containing an exceptionally high concentration of salt - an artificial condition that provides no clear insight on the nature of signal that Y. enterocolitica responds to in a host. However, previous research has indicated that the Ysa system plays a role in the colonization of gastrointestinal tissues of mice. In this study, a series of Ysa promoter fusions to green fluorescent protein gene (gfp) were created to analyze the expression of this T3SS during infection. Using reporter strains, infections were carried out in vitro using HeLa cells and in vivo using the mouse model of yersiniosis. Expression of green fluorescent protein (GFP) was measured from the promoters of yspP (encoding a secreted effector protein) and orf6 (encoding a structural component of the T3SS apparatus) in vitro and in vivo. During the infection of HeLa cells GFP intensity was measured by fluorescence microscopy, while during murine infections GFP expression in tissues was measured by flow cytometry. These approaches, combined with quantification of yspP mRNA transcripts by quantitative reverse transcriptase-polymerase chain reaction (qRT-PCR), demonstrate that the Ysa system is expressed in vitro in a contact-dependent manner, and is expressed in vivo during infection of mice.

Indexed as

Bacterial Secretion SystemsGene Expression Regulation, BacterialAnimalsArtificial Gene FusionBacterial ProteinsDisease Models, AnimalFlow CytometryGene Expression ProfilingGenes, ReporterGreen Fluorescent ProteinsHeLa CellsHumansMiceMicroscopy, FluorescenceReal-Time Polymerase Chain ReactionYersinia enterocoliticaBacterial ProteinsBacterial Secretion SystemsGreen Fluorescent ProteinsIn vivo expressionT3SSY. enterocoliticaYsaYsp

Identifiers

PMID24166928
PMCPMC3892342
OpenAlexW2084179645

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.