Evidence map›Paper›PMID 24165681›Full record

ReviewNature neuroscience2013

Emerging roles for post-transcriptional regulation in circadian clocks.

Chunghun Lim, Ravi Allada

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature neuroscience, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Temperature-driven coordination of circadian transcriptome regulation.bioRxiv : the preprint server for biology · 2023
    Article
  10. Circadian ribosome profiling reveals a role for theProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
  12. Organismal landscape of clock cells and circadian gene expression inbioRxiv : the preprint server for biology · 2023
    Article
  13. Article
  14. Article
  15. Review
  16. The E3 ubiquitin ligase adaptorProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  17. RNA-Binding Proteins and the Complex Pathophysiology of ALS.International journal of molecular sciences · 2021
    Review
  18. A genome-wide microRNA screen identifies the microRNA-183/96/182 cluster as a modulator of circadian rhythms.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  19. Genome-wide screening of circadian and non-circadian impact of Neat1 genetic deletion.Computational and structural biotechnology journal · 2021
    Article
  20. Regulation of circadian rhythm and sleep by miR-375-timeless interaction in Drosophila.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Article

30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Chunghun LimSchool of Nano-Bioscience and Chemical Engineering, Ulsan National Institute of Science and Technology, Ulsan, Republic of Korea.
Ravi Allada

Funding

Sleep Homeostasis, Plasticity and MemoryR01MH092273 · NIMH · NORTHWESTERN UNIVERSITY · PI ALLADA, RAVI · 2011 to 2015
$2.0M
Intercellular Signaling in the Circadian ClockR01NS059042 · NINDS · NORTHWESTERN UNIVERSITY · PI ALLADA, RAVI · 2008 to 2012
$1.6M
NIMH NIH HHS R01MH 092273NINDS NIH HHS R01NS059042
6 · The paper itself

Abstract

Circadian clocks temporally organize behavior and physiology across the 24-h day. Great progress has been made in understanding the molecular basis of timekeeping, with a focus on transcriptional feedback networks that are post-translationally modulated. Yet emerging evidence indicates an important role for post-transcriptional regulation, from splicing, polyadenylation and mRNA stability to translation and non-coding functions exemplified by microRNAs. This level of regulation affects virtually all aspects of circadian systems, from the core timing mechanism and input pathways that synchronize clocks to the environment and output pathways that control overt rhythmicity. We hypothesize that post-transcriptional control confers on circadian clocks enhanced robustness as well as the ability to adapt to different environments. As much of what is known derives from nonneural cells or tissues, future work will be required to investigate the role of post-transcriptional regulation in neural clocks.

Indexed as

Gene Expression RegulationAnimalsCircadian ClocksHumansProtein Processing, Post-TranslationalRNA, MessengerRNA, Messenger

Identifiers

PMID24165681

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.