Evidence map›Paper›PMID 24163372›Full record

ArticleThe Journal of biological chemistry2013

Kinetic flux profiling elucidates two independent acetyl-CoA biosynthetic pathways in Plasmodium falciparum.

Simon A Cobbold, Ashley M Vaughan, Ian A Lewis, Heather J Painter, Nelly Camargo, David H Perlman, Matthew Fishbaugher, Julie Healer, Alan F Cowman, Stefan H I Kappe and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
10.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 95 citations in OpenAlex.

  1. Article
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  7. M-iScience · 2024
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  8. Review
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  11. The mitochondrion ofProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Review
  13. Article
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  15. Article
  16. Review
  17. The Kringle of Life.The protein journal · 2021
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Simon A CobboldFrom the Department of Biochemistry and Molecular Biology and Center for Infectious Disease Dynamics, Pennsylvania State University, State College, Pennsylvania 16802.
Ashley M Vaughan
Ian A Lewis
Heather J Painter
Nelly Camargo
David H Perlman
Matthew Fishbaugher
Julie Healer
Alan F Cowman
Stefan H I Kappe
Manuel Llinás
Center for Infectious Disease Research · USCenter for Disease Dynamics, Economics & Policy · USWalter and Eliza Hall Institute of Medical Research · AUPennsylvania State University · USPrinceton University · US

Funding

Spatial Patterning During DevelopmentP50GM071508 · NIGMS · PRINCETON UNIVERSITY · PI POWELL, SUSAN M · 2004 to 2013
$30.6M
Novel antimalarial strategies using metabolomic network discoveryDP2OD001315 · OD · PRINCETON UNIVERSITY · PI LLINAS, MANUEL · 2007 to 2007
$2.4M
The apicoplast and fatty acid synthesis in Plasmodium liver stagesR56AI080685 · NIAID · SEATTLE BIOMEDICAL RESEARCH INSTITUTE · PI KAPPE, STEFAN HI · 2011 to 2011
$480k
Howard Hughes Medical InstituteNIAID NIH HHS R56 AI080685NIGMS NIH HHS P50 GM071508NIH HHS 1DP2OD001315-01NIH HHS DP2 OD001315
6 · The paper itself

Abstract

The malaria parasite Plasmodium falciparum depends on glucose to meet its energy requirements during blood-stage development. Although glycolysis is one of the best understood pathways in the parasite, it is unclear if glucose metabolism appreciably contributes to the acetyl-CoA pools required for tricarboxylic acid metabolism (TCA) cycle and fatty acid biosynthesis. P. falciparum possesses a pyruvate dehydrogenase (PDH) complex that is localized to the apicoplast, a specialized quadruple membrane organelle, suggesting that separate acetyl-CoA pools are likely. Herein, we analyze PDH-deficient parasites using rapid stable-isotope labeling and show that PDH does not appreciably contribute to acetyl-CoA synthesis, tricarboxylic acid metabolism, or fatty acid synthesis in blood stage parasites. Rather, we find that acetyl-CoA demands are supplied through a "PDH-like" enzyme and provide evidence that the branched-chain keto acid dehydrogenase (BCKDH) complex is performing this function. We also show that acetyl-CoA synthetase can be a significant contributor to acetyl-CoA biosynthesis. Interestingly, the PDH-like pathway contributes glucose-derived acetyl-CoA to the TCA cycle in a stage-independent process, whereas anapleurotic carbon enters the TCA cycle via a stage-dependent phosphoenolpyruvate carboxylase/phosphoenolpyruvate carboxykinase process that decreases as the parasite matures. Although PDH-deficient parasites have no blood-stage growth defect, they are unable to progress beyond the oocyst phase of the parasite mosquito stage.

Indexed as

3-Methyl-2-Oxobutanoate Dehydrogenase (Lipoamide)Acetate-CoA LigaseAcetyl Coenzyme AAnimalsAnophelesCitric Acid CycleFatty AcidsKineticsPhosphoenolpyruvate Carboxykinase (ATP)Phosphoenolpyruvate CarboxylasePlasmodium falciparumProtozoan ProteinsPyruvate Dehydrogenase Complex3-Methyl-2-Oxobutanoate Dehydrogenase (Lipoamide)Acetate-CoA LigaseAcetyl Coenzyme AFatty AcidsPhosphoenolpyruvate Carboxykinase (ATP)Phosphoenolpyruvate CarboxylaseProtozoan ProteinsPyruvate Dehydrogenase ComplexAcetateAcetyl Coenzyme AGlycolysisMalariaPhosphoenolpyruvate CarboxykinasePlasmodiumPyruvate Dehydrogenase ComplexTricarboxylic Acid (TCA) Cycle

Identifiers

PMID24163372
PMCPMC3868748
OpenAlexW2079968363

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.