Evidence map›Paper›PMID 24163129›Full record

ArticleHuman molecular genetics2014

Coregulation and modulation of NFκB-related genes in celiac disease: uncovered aspects of gut mucosal inflammation.

Nora Fernandez-Jimenez, Ainara Castellanos-Rubio, Leticia Plaza-Izurieta, Iñaki Irastorza, Xabier Elcoroaristizabal, Amaia Jauregi-Miguel, Tamara Lopez-Euba, Carlos Tutau, Marian M de Pancorbo, Juan Carlos Vitoria and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Human molecular genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 82 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Article
  4. International journal of molecular medicine · 2026
    Review
  5. Article
  6. Article
  7. Review
  8. mAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  9. Review
  10. Article
  11. Review
  12. Pivotal Role of Inflammation in Celiac Disease.International journal of molecular sciences · 2022
    Review
  13. Article
  14. Celiac disease: From genetics to epigenetics.World journal of gastroenterology · 2022
    Review
  15. Article
  16. Review
  17. Article
  18. A Novel Regulatory Player in the Innate Immune System: Long Non-Coding RNAs.International journal of molecular sciences · 2021
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Nora Fernandez-JimenezImmunogenetics Research Laboratory, Department of Genetics, Physical Anthropology and Animal Physiology, BioCruces Health Research Institute, University of the Basque Country-UPV/EHU, Leioa, Basque Country, Spain.
Ainara Castellanos-Rubio
Leticia Plaza-Izurieta
Iñaki Irastorza
Xabier Elcoroaristizabal
Amaia Jauregi-Miguel
Tamara Lopez-Euba
Carlos Tutau
Marian M de Pancorbo
Juan Carlos Vitoria
Jose Ramon Bilbao
BioCruces Health research Institute · ESUniversity of the Basque Country · ESHospital de Cruces · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is known that the NFκB route is constitutively upregulated in celiac disease (CD), an immune-mediated disorder of the gut caused by intolerance to ingested gluten. Our aim was to scrutinize the expression patterns of several of the most biologically relevant components of the NFκB route in intestinal biopsies from active and treated patients and after in vitro gliadin challenge, and to assess normalization of the expression using an inhibitor of the MALT1 paracaspase. The expression of 93 NFκB genes was measured by RT-PCR in a set of uncultured active and treated CD and control biopsies, and in cultured biopsy series challenged with gliadin, the NFκB modulator, both compounds and none. Methylation of eight genes involved in NFκB signaling was analyzed by conventional pyrosequencing. Groups were compared and Pearson's correlation matrixes were constructed to check for coexpression and co-methylation. Our results confirm the upregulation of the NFκB pathway and show that constitutively altered genes usually belong to the core of the pathway and have central roles, whereas genes overexpressed only in active CD are more peripheral. Additionally, this is the first work to detect methylation level changes in celiac intestinal mucosa. Coexpression is very common in controls, whereas gliadin challenge and especially chronic inflammation present in untreated CD result in the disruption of the regulatory equilibrium. In contrast, co-methylation occurs more often in active CD. Importantly, NFκB modulation partially restores coregulation, opening the door to future therapeutic possibilities and targets.

Indexed as

Gene Expression RegulationCeliac DiseaseCluster AnalysisDNA MethylationGene ExpressionGene Expression ProfilingGene Regulatory NetworksHumansInflammationIntestinal MucosaNF-kappa BPromoter Regions, GeneticSignal TransductionNF-kappa B

Identifiers

PMID24163129
PMCPMC3919015
OpenAlexW2164504476

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.