Evidence map›Paper›PMID 24161942›Full record

ReviewArchives of biochemistry and biophysics2014

Kinetic isotope effects as a probe of hydrogen transfers to and from common enzymatic cofactors.

Daniel Roston, Zahidul Islam, Amnon Kohen

Abstract readReview
In one paragraph

Review in Archives of biochemistry and biophysics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Transitioning enzyme catalysis towards photocatalysis.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2025
    Review
  3. Article
  4. Article
  5. Engineered control of enzyme structural dynamics and function.Protein science : a publication of the Protein Society · 2018
    Review
  6. Article
  7. Article
  8. Article
  9. The quantum mitochondrion and optimal health.Biochemical Society transactions · 2016
    Article
  10. Article
  11. Article
  12. Article
  13. The general base in the thymidylate synthase catalyzed proton abstraction.Physical chemistry chemical physics : PCCP · 2015
    Article
  14. Theory for rates, equilibrium constants, and Brønsted slopes in F1-ATPase single molecule imaging experiments.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  15. Article
  16. Concerted versus stepwise mechanism in thymidylate synthase.Journal of the American Chemical Society · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Daniel RostonDepartment of Chemistry, The University of Iowa, Iowa City, IA 52242, USA.
Zahidul IslamDepartment of Chemistry, The University of Iowa, Iowa City, IA 52242, USA.
Amnon KohenDepartment of Chemistry, The University of Iowa, Iowa City, IA 52242, USA. Electronic address: amnon-kohen@uiowa.edu.
University of Iowa · US

Funding

PREDOCTORAL TRAINING PROGRAM IN BIOTECHNOLOGYT32GM008365 · NIGMS · UNIVERSITY OF IOWA · PI KERNS, ROBERT JOHN · 1990 to 2021
$3.8M
Tunneling and dynamic studies with DHFRR01GM065368 · NIGMS · UNIVERSITY OF IOWA · PI CHEATUM, CHRISTOPHER M · 2002 to 2017
$3.5M
NIGMS NIH HHS R01 GM065368NIGMS NIH HHS R01GM65368NIGMS NIH HHS T32 GM008365
6 · The paper itself

Abstract

Enzymes use a number of common cofactors as sources of hydrogen to drive biological processes, but the physics of the hydrogen transfers to and from these cofactors is not fully understood. Researchers study the mechanistically important contributions from quantum tunneling and enzyme dynamics and connect those processes to the catalytic power of enzymes that use these cofactors. Here we describe some progress that has been made in studying these reactions, particularly through the use of kinetic isotope effects (KIEs). We first discuss the general theoretical framework necessary to interpret experimental KIEs, and then describe practical uses for KIEs in the context of two case studies. The first example is alcohol dehydrogenase, which uses a nicotinamide cofactor to catalyze a hydride transfer, and the second example is thymidylate synthase, which uses a folate cofactor to catalyze both a hydride and a proton transfer.

Indexed as

Alcohol DehydrogenaseAnimalsCoenzymesFolic AcidHumansHydrogenKineticsModels, MolecularNiacinamideThermodynamicsThymidylate SynthaseAlcohol DehydrogenaseCoenzymesFolic AcidHydrogenNiacinamideThymidylate SynthaseFolateHydrogen tunnelingKinetic isotope effectsMarcus-like modelsNicotinamide

Identifiers

PMID24161942
PMCPMC3946509
OpenAlexW2074101683

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.