Evidence map›Paper›PMID 24161165›Full record

ArticleBiomaterials2014

Enhanced silencing and stabilization of siRNA polyplexes by histidine-mediated hydrogen bonds.

Szu-Ting Chou, Kellie Hom, Daoning Zhang, Qixin Leng, Lucas J Tricoli, Jason M Hustedt, Amy Lee, Michael J Shapiro, Joonil Seog, Jason D Kahn and 1 more

Open access · greenAbstract read
In one paragraph

Article in Biomaterials, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
  2. Article
  3. Systemic dual delivery of a tumor-inhibiting plasmid expressing p16 and shRaf.Biochemical and biophysical research communications · 2025
    Article
  4. Article
  5. pH modification of gel mobility shift improves polyplex selection In Vivo.Biochemical and biophysical research communications · 2024
    Article
  6. Review
  7. Article
  8. Delivery of mRNA with Histidine-Lysine Peptides.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  9. Exploring the outer limits of polyplexes.Biochemical and biophysical research communications · 2023
    Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Self-assembled miRNA-switch nanoparticles target denuded regions and prevent restenosis.Molecular therapy : the journal of the American Society of Gene Therapy · 2021
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Szu-Ting ChouDepartment of Pathology, University of Maryland Baltimore, MSTF Building, 10 South Pine Street, Baltimore, MD 21201, United States; Department of Chemical and Biomolecular Engineering, University of Maryland, College Park, MD 20742, United States. Electronic address: stchou@umd.edu.
Kellie Hom
Daoning Zhang
Qixin Leng
Lucas J Tricoli
Jason M Hustedt
Amy Lee
Michael J Shapiro
Joonil Seog
Jason D Kahn
A James Mixson
University of Maryland, College Park · USUniversity of Maryland, Baltimore · USPfizer (United States) · US

Funding

Ident. of Structural Features of HK Polyplexes for Imprv. siRNA Deliv. to TumorsR01CA136938 · NCI · UNIVERSITY OF MARYLAND BALTIMORE · PI MIXSON, ARCHIBALD JAMES · 2009 to 2012
$1.2M
NCI NIH HHS R01 CA136938NCI NIH HHS R01-CA136938
6 · The paper itself

Abstract

Branched peptides containing histidines and lysines (HK) have been shown to be effective carriers for DNA and siRNA. We anticipate that elucidation of the binding mechanism of HK with siRNA will provide greater insight into the self-assembly and delivery of the HK:siRNA polyplex. Non-covalent bonds between histidine residues and nucleic acids may enhance the stability of siRNA polyplexes. We first compared the polyplex biophysical properties of a branched HK with those of branched asparagine-lysine peptide (NK). Consistent with siRNA silencing experiments, gel electrophoresis demonstrated that the HK siRNA polyplex maintained its integrity with prolonged incubation in serum, whereas siRNA in complex with NK was degraded in a time-dependent manner. Isothermal titration calorimetry of various peptides binding to siRNA at pH 7.3 showed that branched polylysine, interacted with siRNA was initially endothermic, whereas branched HK exhibited an exothermic reaction at initial binding. The exothermic interaction indicates formation of non-ionic bonds between histidines and siRNA; purely electrostatic interaction is entropy-driven and endothermic. To investigate the type of non-ionic bond, we studied the protonation state of imidazole rings of a selectively (15)N labeled branched HK by heteronuclear single quantum coherence NMR. The peak of Nδ1-H tautomers of imidazole shifted downfield (in the direction of deprotonation) by 0.5-1.0 ppm with addition of siRNA, providing direct evidence that histidines formed hydrogen bonds with siRNA at physiological pH. These results establish that histidine-rich peptides form hydrogen bonds with siRNA, thereby enhancing the stability and biological activity of the polyplex in vitro and in vivo.

Indexed as

Gene SilencingAsparagineCell Line, TumorHistidineHumansHydrogen BondingHydrogen-Ion ConcentrationLysineMagnetic Resonance SpectroscopyPeptidesPolylysinePolymersProtein ConformationRNA, Small InterferingTransfectionAsparagineHistidineLysinePeptidesPolylysinePolymersRNA, Small InterferingHistidineHK peptideHydrogen bondIsothermal titration calorimetryNuclear magnetic resonancesiRNA

Identifiers

PMID24161165
PMCPMC3920840
OpenAlexW2040260119

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.