Evidence map›Paper›PMID 24159176›Full record

Trial reportBlood2013

Germline and somatic genetic variations of TNFAIP3 in lymphoma complicating primary Sjogren's syndrome.

Gaetane Nocturne, Saida Boudaoud, Corinne Miceli-Richard, Say Viengchareun, Thierry Lazure, Joanne Nititham, Kimberly E Taylor, Averil Ma, Florence Busato, Judith Melki and 9 more

Open access · greenAbstract readMulticenter StudyRandomized Controlled Trial
In one paragraph

Trial report in Blood, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
6.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 122 citations in OpenAlex.

  1. Review
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  12. Post-transcriptional checkpoints in autoimmunity.Nature reviews. Rheumatology · 2023
    Review
  13. Review
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  20. Genetics and epigenetics in primary Sjögren's syndrome.Rheumatology (Oxford, England) · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 10 institutions in 2 countries.

Gaetane NocturneInstitut national de la santé et de la recherche médicale, Unité 1012, Université Paris-Sud, Le Kremlin Bicêtre, France;
Saida Boudaoud
Corinne Miceli-Richard
Say Viengchareun
Thierry Lazure
Joanne Nititham
Kimberly E Taylor
Averil Ma
Florence Busato
Judith Melki
Christopher J Lessard
Kathy L Sivils
Jean-Jacques Dubost
Eric Hachulla
Jacques Eric Gottenberg
Marc Lombès
Jorg Tost
Lindsey A Criswell
Xavier Mariette
Université Paris-Sud · FRUniversity of California, San Francisco · USAssistance Publique – Hôpitaux de Paris · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRCentre Hospitalier Universitaire de Clermont-Ferrand · FRHôpital Claude Huriez · FRHôpital d'Hautepierre · FROklahoma Medical Research Foundation · USUniversité Paris-Saclay · FRUniversity of Oklahoma Health Sciences Center · US

Funding

UCSF Liver Core CenterP30DK026743 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Holger Willenbring · 1986 to 2026
$30.7M
Pathogenic B Cells in Sjogren's SyndromeP50AR060804 · NIAMS · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI SIVILS, KATHY L. · 2011 to 2015
$7.9M
Pre-Clinical Studies to Identify SLE Therapeutic TargetsU19AI082714 · NIAID · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI JAMES, JUDITH A · 2009 to 2018
$6.2M
NIAID NIH HHS 5U19 AI082714NIAID NIH HHS U19 AI082714NIAMS NIH HHS P50 AR060804NIAMS NIH HHS P50 AR0608040NIDDK NIH HHS P30 DK026743
6 · The paper itself

Abstract

Several autoimmune diseases, including primary Sjögren's syndrome (pSS), are associated with an increased risk for lymphoma. Polymorphisms of TNFAIP3, which encodes the A20 protein that plays a key role in controlling nuclear factor κB activation, have been associated with several autoimmune diseases. Somatic mutations of TNFAIP3 have been observed in the mucosa-associated lymphoid tissue lymphoma subtype frequently associated with pSS. We studied germline and somatic abnormalities of TNFAIP3 in 574 patients with pSS, including 25 with lymphoma. Nineteen additional patients with pSS and lymphoma were available for exome sequence analysis. Functional abnormalities of A20 were assessed by gene reporter assays. The rs2230926 exonic variant was associated with an increased risk for pSS complicated by lymphoma (odds ratio, 3.36 [95% confidence interval, 1.34-8.42], and odds ratio, 3.26 [95% confidence interval, 1.31-8.12], vs controls and pSS patients without lymphoma, respectively; P = .011). Twelve (60%) of the 20 patients with paired germline and lymphoma TNFAIP3 sequence data had functional abnormalities of A20: 6 in germline DNA, 5 in lymphoma DNA, and 1 in both. The frequency was even higher (77%) among pSS patients with mucosa-associated lymphoid tissue lymphoma. Some of these variants showed impaired control of nuclear factor κB activation. These results support a key role for germline and somatic variations of A20 in the transformation between autoimmunity and lymphoma.

Indexed as

ExonsGerm-Line MutationPolymorphism, Single NucleotideDNA-Binding ProteinsFemaleFollow-Up StudiesHumansIntracellular Signaling Peptides and ProteinsLymphoma, B-Cell, Marginal ZoneMaleNeoplasm ProteinsNF-kappa BNuclear ProteinsProspective StudiesSjogren's SyndromeTumor Necrosis Factor alpha-Induced Protein 3DNA-Binding ProteinsIntracellular Signaling Peptides and ProteinsNeoplasm ProteinsNF-kappa BNuclear ProteinsTNFAIP3 protein, humanTumor Necrosis Factor alpha-Induced Protein 3

Identifiers

PMID24159176
PMCPMC3862283
OpenAlexW2074893271

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.