Evidence map›Paper›PMID 24158514›Full record

ArticleArteriosclerosis, thrombosis, and vascular biology2014

The critical role of mRNA destabilizing protein heterogeneous nuclear ribonucleoprotein d in 3' untranslated region-mediated decay of low-density lipoprotein receptor mRNA in liver tissue.

Amar Bahadur Singh, Hai Li, Chin Fung Kelvin Kan, Bin Dong, Mark R Nicolls, Jingwen Liu

Open access · bronzeAbstract read
In one paragraph

Article in Arteriosclerosis, thrombosis, and vascular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 31 citations in OpenAlex.

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  20. Cholesterol and lipoprotein metabolism: Early Career Committee contribution.Arteriosclerosis, thrombosis, and vascular biology · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Amar Bahadur SinghFrom the Veterans Affairs Palo Alto Health Care System, CA (A.B.S., H.L., C.F.K.K., B.D., M.R.N., J.L.); and Department of Medicine, Stanford University, CA (A.B.S., H.L., B.D., M.R.N.).
Hai Li
Chin Fung Kelvin Kan
Bin Dong
Mark R Nicolls
Jingwen Liu
Stanford University · USVA Palo Alto Health Care System · US

Funding

The Cellular Response to Elafin in PAHP01HL108797 · NHLBI · STANFORD UNIVERSITY · PI NOLAN, GARRY P · 2011 to 2021
$19.7M
Critical Role for Microvasculature in Airway TransplantationR01HL095686 · NHLBI · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI NICOLLS, MARK ROBERT · 2010 to 2022
$4.7M
Targeting PCSK9 Transcription to Combat Hypercholesterolemia by BerberineR01AT006336 · NCCIH · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI LIU, JINGWEN · 2012 to 2016
$1.7M
Regulation of Liver LDL Receptor Expression by BerberineR01AT002543 · NCCIH · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI LIU, JINGWEN · 2005 to 2009
$1.7M
Statin-Berberine Combination Therapy in HyperlipidemiaR21AT003195 · NCCIH · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI LIU, JINGWEN · 2008 to 2009
$385k
NCCIH NIH HHS 1R01AT002543-01A1NCCIH NIH HHS 1R01AT006336-01A1NCCIH NIH HHS 1R21AT003195-01A2NCCIH NIH HHS R01 AT002543NCCIH NIH HHS R01 AT006336NCCIH NIH HHS R21 AT003195NHLBI NIH HHS P01 HL108797NHLBI NIH HHS R01 HL095686
6 · The paper itself

Abstract

objectivePrevious studies showed that low-density lipoprotein receptor (LDLR) mRNA 3' untranslated region (UTR) contains regulatory elements responsible for rapid mRNA turnover in hepatic cells and mediates the mRNA stabilization induced by berberine (BBR). Here, we elucidate the underlying mechanism of BBR's action by characterizing mRNA-binding proteins that modulate LDLR mRNA decay via 3'UTR in liver tissue in vivo. APPROACH AND

resultsWe generated a transgenic mouse model (Alb-Luc-UTR) that expresses Luc-LDLR3'UTR reporter gene driven by the albumin promoter to study 3'UTR function in mediating LDLR mRNA decay in liver tissue. We show that treating Alb-Luc-UTR mice with BBR led to significant increases in hepatic bioluminescence signals, Luc-UTR mRNA, and LDLR mRNA levels as compared with control mice. These effects were accompanied by specific reductions of mRNA decay-promoting factor heterogeneous nuclear ribonucleoprotein D (hnRNP D) in liver of BBR-treated mice. Knockdown and overexpression studies further demonstrated that hnRNP D p37 isoform plays a major role in promoting hepatic LDLR mRNA degradation. In addition, we examined LDLR mRNA half-life, Luc-UTR reporter activity, and hnRNP D expression levels in cell lines derived from extrahepatic tissues. We demonstrated that strengths of 3'UTR in promoting mRNA degradation correlate with hnRNP D cellular abundances in nonhepatic cell lines, thereby suggesting its involvement in LDLR mRNA degradation beyond liver tissue.

conclusionshnRNP D is critically involved in LDLR mRNA degradation in liver tissue in vivo. The inverse relationship of hnRNP D abundance with LDLR mRNA levels after BBR treatment suggests the potential of hnRNP D of being a novel therapeutic target for LDL cholesterol lowering.

Indexed as

3' Untranslated RegionsRNA StabilityAlbuminsAnimalsBase SequenceBerberineFemaleGene Expression RegulationGenes, ReporterHalf-LifeHepatocytesHep G2 CellsHeterogeneous-Nuclear Ribonucleoprotein DHumansLiverLuciferases3' Untranslated RegionsAlbuminsBerberineHeterogeneous-Nuclear Ribonucleoprotein DLDLR protein, humanLuciferasesReceptors, LDLRNA, Messenger3' untranslated regionsAU rich elementsberberinehypercholesterolemiareceptors, LDLRNA stability

Identifiers

PMID24158514
PMCPMC4032120
OpenAlexW2048275551

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.