Evidence map›Paper›PMID 24158498›Full record

ArticleExtremophiles : life under extreme conditions2014

Specificities and pH profiles of adenine and hypoxanthine-guanine-xanthine phosphoribosyltransferases (nucleotide synthases) of the thermoacidophile archaeon Sulfolobus solfataricus.

Michael Riis Hansen, Kristine Steen Jensen, Mads Skytte Rasmussen, Stig Christoffersen, Anders Kadziola, Kaj Frank Jensen

Erratum issuedAbstract read
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In one paragraph

Article in Extremophiles : life under extreme conditions, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Isolation and Analysis of Salt Response ofIndian journal of microbiology · 2016
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Michael Riis HansenDepartment of Biology, University of Copenhagen, Ole Maaløes Vej 5, 2200, Copenhagen N, Denmark, mrh@temple.edu.
Kristine Steen Jensen
Mads Skytte Rasmussen
Stig Christoffersen
Anders Kadziola
Kaj Frank Jensen
University of Copenhagen · DKTemple University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two open reading frames in the genome of Sulfolobus solfataricus (SSO2342 [corrected] and SSO2424) were cloned and expressed in E. coli. The protein products were purified and their enzymatic activity characterized. Although SSO2342 [corrected] was annotated as a gene (gpT-1) encoding a 6-oxopurine phosphoribosyltransferase (PRTase), the protein product turned out to be a PRTase highly specific for adenine and we suggest that the reading frame should be renamed apT. The other reading frame SSO2424 (gpT-2) proved to be a true 6-oxopurine PRTase active with hypoxanthine, xanthine and guanine as substrates, and we suggest that the gene should be renamed gpT. Both enzymes exhibited unusual profiles of activity versus pH. The adenine PRTase showed the highest activity at pH 7.5-8.5, but had a distinct peak of activity also at pH 4.5. The 6-oxo PRTase showed maximal activity with hypoxanthine and guanine around pH 4.5, while maximal activity with xanthine was observed at pH 7.5. We discuss likely reasons why SSO2342 [corrected] in S. solfataricus and similar open reading frames in other Crenarchaeota could not be identified as genes encoding APRTase.

Indexed as

AdenineAmino Acid SequenceArchaeal ProteinsBase SequenceGuanineHydrogen-Ion ConcentrationHypoxanthineMolecular Sequence DataPentosyltransferasesSubstrate SpecificitySulfolobus solfataricusXanthineAdenineArchaeal ProteinsGuanineHypoxanthinePentosyltransferasesXanthine

Identifiers

PMID24158498
OpenAlexW2059051745

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.