Evidence map›Paper›PMID 24158435›Full record

ArticleThe Journal of biological chemistry2013

Phosphorylation of the cryptochrome 1 C-terminal tail regulates circadian period length.

Peng Gao, Seung-Hee Yoo, Kyung-Jong Lee, Clark Rosensweig, Joseph S Takahashi, Benjamin P Chen, Carla B Green

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 1 synthesis or guideline pooled it, 76 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. A PDZ scaffolding/CaM-mediated pathway in Cryptochrome signaling.Protein science : a publication of the Protein Society · 2024
    Article
  12. Review
  13. A structural decryption of cryptochromes.Frontiers in chemistry · 2024
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Peng GaoFrom the Department of Neuroscience, University of Texas Southwestern Medical Center at Dallas, Dallas, Texas 75390.
Seung-Hee Yoo
Kyung-Jong Lee
Clark Rosensweig
Joseph S Takahashi
Benjamin P Chen
Carla B Green
The University of Texas Southwestern Medical Center · US

Funding

DNA-PKcs Phosphorylation on Hematopoietic Stem Cells Genome MaintenanceR01CA166677 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI CHEN, BENJAMIN PING-CHI · 2012 to 2016
$1.6M
Structure/Function Studies of Mammalian Circadian Clock ProteinsR01GM090247 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI GREEN, CARLA B. · 2011 to 2014
$1.3M
Howard Hughes Medical InstituteNCI NIH HHS R01 CA166677NIGMS NIH HHS R01 GM090247
6 · The paper itself

Abstract

The Cryptochrome (CRY) proteins are critical components of the mammalian circadian clock and act to rhythmically repress the activity of the transcriptional activators CLOCK and BMAL1 at the heart of the clock mechanism. The CRY proteins are part of a large repressive complex, the components of which are not completely known. Using mass spectroscopy, we identified the catalytic subunit of DNA-dependent protein kinase as a CRY-interacting protein and found that loss or inhibition of this kinase results in circadian rhythms with abnormally long periods. We then identified serine 588 in the C-terminal tail of mouse CRY1 as a potential DNA-PK phosphorylation site but surprisingly found that the phosphomimetic mutation S588D also results in long period rhythms, similar to the loss of DNA-PK. Consistent with this, we found that phosphorylation of this site is increased in cells lacking DNA-PK, suggesting that DNA-PK negatively regulates the phosphorylation of this site most likely through indirect means. Furthermore, we found that phosphorylation of this site increases the stability of the CRY1 protein and prevents FBXL3-mediated degradation. The phosphorylation of this site is robustly rhythmic in mouse liver nuclei, peaking in the middle of the circadian day at a time when CRY1 levels are declining. Therefore, these data suggest a new role for the C-terminal tail of CRY1 in which phosphorylation rhythmically regulates CRY1 stability and contributes to the proper circadian period length.

Indexed as

Amino Acid SequenceAnimalsCalcium-Binding ProteinsCells, CulturedCircadian ClocksCryptochromesDNA-Activated Protein KinaseDNA-Binding ProteinsGene Knockout TechniquesHEK293 CellsHumansMaleMiceMice, Inbred C57BLMolecular Sequence DataNuclear ProteinsCalcium-Binding ProteinsCIB1 protein, humanCRY1 protein, humanCry1 protein, mouseCry2 protein, mouseCryptochromesDNA-Activated Protein KinaseDNA-Binding ProteinsNuclear ProteinsPrkdc protein, mouseSerineCircadian ClockPhosphorylationProtein KinasesProtein StabilityTranscription Repressor

Identifiers

PMID24158435
PMCPMC3853276
OpenAlexW2030685718

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.