Evidence map›Paper›PMID 24155944›Full record

ArticlePloS one2013

Molecular cloning and characterization of a newly isolated pyrethroid-degrading esterase gene from a genomic library of Ochrobactrum anthropi YZ-1.

Zhiyong Ruan, Yi Zhai, Jinlong Song, Yanhua Shi, Kang Li, Bin Zhao, Yanchun Yan

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Pyrethroid Carboxylesterase PytH fromApplied and environmental microbiology · 2020
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zhiyong RuanCollege of Life Science and Technology, Huazhong Agricultural University, Wuhan, China ; Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Science, Beijing, China.
Yi Zhai
Jinlong Song
Yanhua Shi
Kang Li
Bin Zhao
Yanchun Yan

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel pyrethroid-degrading esterase gene pytY was isolated from the genomic library of Ochrobactrum anthropi YZ-1. It possesses an open reading frame (ORF) of 897 bp. Blast search showed that its deduced amino acid sequence shares moderate identities (30% to 46%) with most homologous esterases. Phylogenetic analysis revealed that PytY is a member of the esterase VI family. pytY showed very low sequence similarity compared with reported pyrethroid-degrading genes. PytY was expressed, purified, and characterized. Enzyme assay revealed that PytY is a broad-spectrum degrading enzyme that can degrade various pyrethroids. It is a new pyrethroid-degrading gene and enriches genetic resource. Kinetic constants of Km and Vmax were 2.34 mmol·L(-1) and 56.33 nmol min(-1), respectively, with lambda-cyhalothrin as substrate. PytY displayed good degrading ability and stability over a broad range of temperature and pH. The optimal temperature and pH were of 35°C and 7.5. No cofactors were required for enzyme activity. The results highlighted the potential use of PytY in the elimination of pyrethroid residuals from contaminated environments.

Indexed as

Genomic LibraryAmino Acid SequenceCloning, MolecularEsterasesGene Expression Regulation, BacterialGenes, BacterialHydrogen-Ion ConcentrationIonsKineticsMetalsMolecular Sequence DataOchrobactrum anthropiPhylogenyPyrethrinsSequence AlignmentSequence Analysis, DNAEsterasesIonsMetalsPyrethrins

Identifiers

PMID24155944
PMCPMC3796475

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.