Evidence map›Paper›PMID 24155381›Full record

ArticleJournal of virology2014

An avian retrovirus uses canonical expression and processing mechanisms to generate viral microRNA.

Yongxiu Yao, Lorraine P Smith, Venugopal Nair, Mick Watson

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Review
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  4. Avian Leukosis: Will We Be Able to Get Rid of It?Animals : an open access journal from MDPI · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Yongxiu YaoViral Oncogenesis Group, The Pirbright Institute, Compton Laboratory, Compton, Berkshire, United Kingdom.
Lorraine P Smith
Venugopal Nair
Mick Watson
The Pirbright Institute · GBRoslin Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BB/G009163/1Biotechnology and Biological Sciences Research Council BBS/E/D/20211551Biotechnology and Biological Sciences Research Council BBS/E/D/20211552Medical Research Council MR/K001744/1
6 · The paper itself

Abstract

To date, the vast majority of known virus-encoded microRNAs (miRNAs) are derived from polymerase II transcripts encoded by DNA viruses. A recent demonstration that the bovine leukemia virus, a retrovirus, uses RNA polymerase III to directly transcribe the pre-miRNA hairpins to generate viral miRNAs further supports the common notion that the canonical pathway of miRNA biogenesis does not exist commonly among RNA viruses. Here, we show that an exogenous virus-specific region, termed the E element or XSR, of avian leukosis virus subgroup J (ALV-J), a member of avian retrovirus, encodes a novel miRNA, designated E (XSR) miRNA, using the canonical miRNA biogenesis pathway. Detection of novel microRNA species derived from the E (XSR) element, a 148-nucleotide noncoding RNA with hairpin structure, showed that the E (XSR) element has the potential to function as a microRNA primary transcript, demonstrating a hitherto unknown function with possible roles in myeloid leukosis associated with ALV-J.

Indexed as

Avian Leukosis VirusBase SequenceDNA PrimersHEK293 CellsHumansMicroRNAsPolymerase Chain ReactionRNA InterferenceRNA, ViralSequence Homology, Nucleic AcidDNA PrimersMicroRNAsRNA, Viral

Identifiers

PMID24155381
PMCPMC3911700
OpenAlexW2109270817

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.