Evidence map›Paper›PMID 24155374›Full record

ArticleJournal of virology2014

Isolation and characterization of the herpes simplex virus 1 terminase complex.

Jason D Heming, Jamie B Huffman, Lisa M Jones, Fred L Homa

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Terminase Subunits from the Pseudomonas-Phage E217.Journal of molecular biology · 2022
    Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jason D HemingDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Jamie B Huffman
Lisa M Jones
Fred L Homa
University of Pittsburgh · USWashington University in St. Louis · US

Funding

TrainingP41GM103422 · NIGMS · WASHINGTON UNIVERSITY · PI YARASHESKI, KEVIN E · 2012 to 2019
$12.0M
Viral Persistence and PathogenesisT32AI049820 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DELUCA, NEAL A. · 2001 to 2024
$5.5M
Structure and Function of the Herpesvirus Capsid and its DNA-Packaging MachineryR01AI089803 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CONWAY, JAMES F., HOMA, FREDERICK L · 2011 to 2019
$4.0M
Herpes Simplex Virus Capsid Assembly and DNA PackagingR01AI060836 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HOMA, FREDERICK L · 2006 to 2010
$1.6M
Herpes Simples Virus Capsid Assembly and DNA PackagingR56AI060836 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HOMA, FREDERICK L · 2011 to 2011
$379k
NIAID NIH HHS AI049820NIAID NIH HHS AI060836NIAID NIH HHS R01 AI060836NIAID NIH HHS R01 AI089803NIAID NIH HHS R56 AI060836NIAID NIH HHS T32 AI049820NIGMS NIH HHS P41 GM103422PHS HHS A1089803
6 · The paper itself

Abstract

During herpes simplex virus 1 (HSV-1) infection, empty procapsids are assembled and subsequently filled with the viral genome by means of a protein complex called the terminase, which is comprised of the HSV-1 UL15, UL28, and UL33 proteins. Biochemical studies of the terminase proteins have been hampered by the inability to purify the intact terminase complex. In this study, terminase complexes were isolated by tandem-affinity purification (TAP) using recombinant viruses expressing either a full-length NTAP-UL28 fusion protein (vFH476) or a C-terminally truncated NTAP-UL28 fusion protein (vFH499). TAP of the UL28 protein from vFH476-infected cells, followed by silver staining, Western blotting, and mass spectrometry, identified the UL15, UL28, and UL33 subunits, while TAP of vFH499-infected cells confirmed previous findings that the C terminus of UL28 is required for UL28 interaction with UL33 and UL15. Analysis of the oligomeric state of the purified complexes by sucrose density gradient ultracentrifugation revealed that the three proteins formed a complex with a molecular mass that is consistent with the formation of a UL15-UL28-UL33 heterotrimer. In order to assess the importance of conserved regions of the UL15 and UL28 proteins, recombinant NTAP-UL28 viruses with mutations of the putative UL28 metal-binding domain or within the UL15 nuclease domain were generated. TAP of UL28 complexes from cells infected with each domain mutant demonstrated that the conserved cysteine residues of the putative UL28 metal-binding domain and conserved amino acids within the UL15 nuclease domain are required for the cleavage and packaging functions of the viral terminase, but not for terminase complex assembly.

Indexed as

AnimalsBase SequenceBlotting, SouthernBlotting, WesternChlorocebus aethiopsChromatography, AffinityDNA, ViralEndodeoxyribonucleasesHerpesvirus 1, HumanMass SpectrometryMutationVero CellsDNA, ViralEndodeoxyribonucleasesterminase

Identifiers

PMID24155374
PMCPMC3911699
OpenAlexW2035306894

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.