Evidence map›Paper›PMID 24155237›Full record

ArticleThe Journal of biological chemistry2013

Enzymatic basis for N-glycan sialylation: structure of rat α2,6-sialyltransferase (ST6GAL1) reveals conserved and unique features for glycan sialylation.

Lu Meng, Farhad Forouhar, David Thieker, Zhongwei Gao, Annapoorani Ramiah, Heather Moniz, Yong Xiang, Jayaraman Seetharaman, Sahand Milaninia, Min Su and 9 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 131 citations in OpenAlex.

  1. Article
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  4. The Role of Glycans in Human Immunity-A Sweet Code.Molecules (Basel, Switzerland) · 2025
    Review
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  6. Article
  7. Protein N -Glycans in Healthy and Sclerotic Glomeruli in Diabetic Kidney Disease.Journal of the American Society of Nephrology : JASN · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 4 countries.

Lu MengFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Farhad Forouhar
David Thieker
Zhongwei Gao
Annapoorani Ramiah
Heather Moniz
Yong Xiang
Jayaraman Seetharaman
Sahand Milaninia
Min Su
Robert Bridger
Lucas Veillon
Parastoo Azadi
Gregory Kornhaber
Lance Wells
Gaetano T Montelione
Robert J Woods
Liang Tong
Kelley W Moremen
University of Georgia · USStructural Genomics Consortium · CARutgers, The State University of New Jersey · US

Funding

University of Georgia ProjectU54GM094597 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI MONTELIONE, GAETANO T · 2010 to 2014
$36.9M
ZINC DEFICIENCY &PROTEIN EXPRESSION IN RAT OLFACTORY BULBSP41RR005351 · NCRR · UNIVERSITY OF GEORGIA (UGA) · PI MOREMEN, KELLEY W. · 1989 to 2011
$18.4M
TR&D3. Approaches to Proteoglycan Function at Biochemical and Cellular LevelsP41GM103390 · NIGMS · UNIVERSITY OF GEORGIA · PI LIVE, DAVID H · 2012 to 2019
$14.5M
Integrating Experiment and Theory to Characterize Diagnostic Antibody SpecificityR01GM094919 · NIGMS · UNIVERSITY OF GEORGIA · PI WOODS, ROBERT J · 2010 to 2013
$1.7M
NCRR NIH HHS P41 RR005351NCRR NIH HHS P41RR005351NIGMS NIH HHS P41 GM103390NIGMS NIH HHS P41GM103390NIGMS NIH HHS R01 GM094919NIGMS NIH HHS R01GM094919NIGMS NIH HHS U54 GM094597
6 · The paper itself

Abstract

Glycan structures on glycoproteins and glycolipids play critical roles in biological recognition, targeting, and modulation of functions in animal systems. Many classes of glycan structures are capped with terminal sialic acid residues, which contribute to biological functions by either forming or masking glycan recognition sites on the cell surface or secreted glycoconjugates. Sialylated glycans are synthesized in mammals by a single conserved family of sialyltransferases that have diverse linkage and acceptor specificities. We examined the enzymatic basis for glycan sialylation in animal systems by determining the crystal structures of rat ST6GAL1, an enzyme that creates terminal α2,6-sialic acid linkages on complex-type N-glycans, at 2.4 Å resolution. Crystals were obtained from enzyme preparations generated in mammalian cells. The resulting structure revealed an overall protein fold broadly resembling the previously determined structure of pig ST3GAL1, including a CMP-sialic acid-binding site assembled from conserved sialylmotif sequence elements. Significant differences in structure and disulfide bonding patterns were found outside the sialylmotif sequences, including differences in residues predicted to interact with the glycan acceptor. Computational substrate docking and molecular dynamics simulations were performed to predict and evaluate the CMP-sialic acid donor and glycan acceptor interactions, and the results were compared with kinetic analysis of active site mutants. Comparisons of the structure with pig ST3GAL1 and a bacterial sialyltransferase revealed a similar positioning of donor, acceptor, and catalytic residues that provide a common structural framework for catalysis by the mammalian and bacterial sialyltransferases.

Indexed as

Crystallography, X-RayAnimalsBacteriabeta-D-Galactoside alpha 2-6-SialyltransferaseBinding SitesMolecular Docking SimulationMolecular Dynamics SimulationPolysaccharidesProtein ConformationRatsSialic AcidsSialyltransferasesStructure-Activity RelationshipSwinebeta-D-Galactoside alpha 2-6-SialyltransferasePolysaccharidesSialic AcidsSialyltransferasesAMBERCarbohydrate BiosynthesisCarbohydrate GlycoproteinEnzyme StructureGLYCAMGlycobiologyGlycoprotein BiosynthesisMolecular Dynamics

Identifiers

PMID24155237
PMCPMC3843080
OpenAlexW2132632000

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.