Evidence map›Paper›PMID 24153184›Full record

ArticleNature2013

Crystal structure of the 14-subunit RNA polymerase I.

Carlos Fernández-Tornero, María Moreno-Morcillo, Umar J Rashid, Nicholas M I Taylor, Federico M Ruiz, Tim Gruene, Pierre Legrand, Ulrich Steuerwald, Christoph W Müller

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Nature, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 124 papers.

0numbers the graph read from it
0cells of the map it votes in
124citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

124 citing papers in PubMed, 199 citations in OpenAlex.

  1. Review
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  12. Genes & diseases · 2024
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64 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Carlos Fernández-Tornero1] Centro de Investigaciones Biológicas, Consejo Superior de Investigaciones Científicas, Ramiro de Maeztu 9, 28040 Madrid, Spain [2].
María Moreno-Morcillo
Umar J Rashid
Nicholas M I Taylor
Federico M Ruiz
Tim Gruene
Pierre Legrand
Ulrich Steuerwald
Christoph W Müller
European Molecular Biology Laboratory · DECentro de Investigaciones Biológicas Margarita Salas · ESConsejo Superior de Investigaciones Científicas · ESSynchrotron soleil · FRUniversity of Göttingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein biosynthesis depends on the availability of ribosomes, which in turn relies on ribosomal RNA production. In eukaryotes, this process is carried out by RNA polymerase I (Pol I), a 14-subunit enzyme, the activity of which is a major determinant of cell growth. Here we present the crystal structure of Pol I from Saccharomyces cerevisiae at 3.0 Å resolution. The Pol I structure shows a compact core with a wide DNA-binding cleft and a tightly anchored stalk. An extended loop mimics the DNA backbone in the cleft and may be involved in regulating Pol I transcription. Subunit A12.2 extends from the A190 jaw to the active site and inserts a transcription elongation factor TFIIS-like zinc ribbon into the nucleotide triphosphate entry pore, providing insight into the role of A12.2 in RNA cleavage and Pol I insensitivity to α-amanitin. The A49-A34.5 heterodimer embraces subunit A135 through extended arms, thereby contacting and potentially regulating subunit A12.2.

Indexed as

Catalytic DomainCrystallography, X-RayDNAModels, MolecularPeptide Chain Elongation, TranslationalProtein BindingProtein ConformationProtein MultimerizationProtein SubunitsRNA Polymerase IRNA Polymerase IIRNA Polymerase IIISaccharomyces cerevisiaeTranscription, GeneticDNAProtein SubunitsRNA Polymerase IRNA Polymerase IIRNA Polymerase III

Identifiers

PMID24153184
OpenAlexW2004546827

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.