Evidence map›Paper›PMID 24151546›Full record

ArticleeLife2013

Multiple interfaces between a serine recombinase and an enhancer control site-specific DNA inversion.

Meghan M McLean, Yong Chang, Gautam Dhar, John K Heiss, Reid C Johnson

Open access · goldAbstract read
In one paragraph

Article in eLife, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

  1. Adaptive evolution ofMicrobial genomics · 2026
    Article
  2. Gene regulation inMicrobiology and molecular biology reviews : MMBR · 2025
    Review
  3. Article
  4. Review
  5. Structural basis of directionality control in large serine integrases.bioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Serine Resolvases.Microbiology spectrum · 2015
    Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Meghan M McLeanDepartment of Biological Chemistry, David Geffen School of Medicine , University of California, Los Angeles , Los Angeles , United States.
Yong Chang
Gautam Dhar
John K Heiss
Reid C Johnson
University of California, Los Angeles · US

Funding

Molecular Analysis of Site Specific DNA RecombinationR37GM038509 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHNSON, REID C · 2005 to 2014
$6.6M
MOLECULAR ANALYSIS OF SITE-SPECIFIC DNA RECOMBINATIONR01GM038509 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHNSON, REID C · 1987 to 2018
$4.7M
PREDOCTORAL TRAINING PROGRAM IN GENETIC MECHANISMS AT UCT32GM007104 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GOBER, JAMES W · 1985 to 2011
$3.6M
NIGMS NIH HHS GM038509NIGMS NIH HHS GM07104NIGMS NIH HHS R01 GM038509NIGMS NIH HHS R37 GM038509NIGMS NIH HHS T32 GM007104
6 · The paper itself

Abstract

Serine recombinases are often tightly controlled by elaborate, topologically-defined, nucleoprotein complexes. Hin is a member of the DNA invertase subclass of serine recombinases that are regulated by a remote recombinational enhancer element containing two binding sites for the protein Fis. Two Hin dimers bound to specific recombination sites associate with the Fis-bound enhancer by DNA looping where they are remodeled into a synaptic tetramer competent for DNA chemistry and exchange. Here we show that the flexible beta-hairpin arms of the Fis dimers contact the DNA binding domain of one subunit of each Hin dimer. These contacts sandwich the Hin dimers to promote remodeling into the tetramer. A basic region on the Hin catalytic domain then contacts enhancer DNA to complete assembly of the active Hin tetramer. Our results reveal how the enhancer generates the recombination complex that specifies DNA inversion and regulates DNA exchange by the subunit rotation mechanism. DOI:http://dx.doi.org/10.7554/eLife.01211.001.

Indexed as

Enhancer Elements, GeneticGene Expression Regulation, BacterialAmino Acid SequenceBacterial ProteinsBase SequenceBinding SitesDNA NucleotidyltransferasesDNA, SuperhelicalEscherichia coliFactor For Inversion Stimulation ProteinModels, MolecularMolecular Sequence DataProtein BindingProtein Interaction Domains and MotifsProtein MultimerizationProtein Structure, SecondaryBacterial ProteinsDNA NucleotidyltransferasesDNA, SuperhelicalFactor For Inversion Stimulation ProteinHin recombinaseRecombinant ProteinsDNA strand exchangeE. colirecombinational enhancerSalmonella entericaserine recombinasesite-specific DNA recombinationsynaptic complex

Identifiers

PMID24151546
PMCPMC3798978
OpenAlexW2108203191

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.