Evidence map›Paper›PMID 24149573›Full record

ReviewEpigenetics2014

Homeland security in the C. elegans germ line: insights into the biogenesis and function of piRNAs.

Dionna M Kasper, Kathryn E Gardner, Valerie Reinke

Abstract readReview
In one paragraph

Review in Epigenetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. RNA Granules: A View from the RNA Perspective.Molecules (Basel, Switzerland) · 2020
    Review
  6. Review
  7. Transcriptional quiescence in primordial germ cells.Critical reviews in biochemistry and molecular biology · 2018
    Review
  8. Article
  9. Review
  10. Article
  11. Endogenous siRNAs: regulators of internal affairs.Biochemical Society transactions · 2014
    Review
  12. Article
  13. Review
  14. Article
  15. Journal of neurogenetics
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Dionna M KasperDepartment of Genetics; Yale University; New Haven, CT USA.
Kathryn E GardnerDepartment of Genetics; Yale University; New Haven, CT USA.
Valerie ReinkeDepartment of Genetics; Yale University; New Haven, CT USA.

Funding

Comprehensive Identification of Worm and Fly Transcription Factor Binding SitesU54HG007002 · NHGRI · UNIVERSITY OF WASHINGTON · PI WATERSTON, ROBERT H · 2012 to 2012
$1.4M
Investigating Rb/E2F control over gene expression during germline differentiationF32GM101778 · NIGMS · YALE UNIVERSITY · PI GARDNER, KATHRYN ELIZABETH · 2012 to 2013
$90k
NHGRI NIH HHS U54 HG007002NHGRI NIH HHS U54HG007002NIGMS NIH HHS F32 GM101778NIGMS NIH HHS F32GM101778
6 · The paper itself

Abstract

While most eukaryotic genomes contain transposable elements that can provide select evolutionary advantages to a given organism, failure to tightly control the mobility of such transposable elements can result in compromised genomic integrity of both parental and subsequent generations. Together with the Piwi subfamily of Argonaute proteins, small, non-coding Piwi-interacting RNAs (piRNAs) primarily function in the germ line to defend the genome against the potentially deleterious effects that can be caused by transposition. Here, we describe recent discoveries concerning the biogenesis and function of piRNAs in the nematode Caenorhabditis elegans, illuminating how the faithful production of these mature species can impart a robust defense mechanism for the germ line to counteract problems caused by foreign genetic elements across successive generations by contributing to the epigenetic memory of non-self vs. self.

Indexed as

AnimalsCaenorhabditis elegansDNA Transposable ElementsEpigenesis, GeneticGenomic InstabilityGerm CellsHumansReproductionRNA, Small InterferingDNA Transposable ElementsRNA, Small Interfering22G-RNAArgonaute proteinsbiogenesisC. elegansepigeneticsgerm linepiRNA/21U-RNAPiwi/PRG-1transgenerational silencing

Identifiers

PMID24149573
PMCPMC3928187

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.