Evidence map›Paper›PMID 24147014›Full record

ArticlePloS one2013

Comparative analysis of mitochondrial genomes of five aphid species (Hemiptera: Aphididae) and phylogenetic implications.

Yuan Wang, Xiao-Lei Huang, Ge-Xia Qiao

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Unraveling Mitochondrial Genome Evolution inJournal of fungi (Basel, Switzerland) · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Comprehensive Analysis of the Fourteen Complete Genome Sequences ofJournal of microbiology and biotechnology · 2024
    Article
  6. Article
  7. Article
  8. The complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. The complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2021
    Article
  14. Article
  15. The complete mitochondrial genome of the strawberry aphidMitochondrial DNA. Part B, Resources · 2021
    Article
  16. Article
  17. Mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2020
    Article
  18. The complete mitochondrial genome of the bamboo aphidMitochondrial DNA. Part B, Resources · 2020
    Article
  19. The first complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2020
    Article
  20. The complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Yuan WangKey Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Chaoyang District, Beijing, People's Republic of China ; College of Life Sciences, University of Chinese Academy of Sciences, Shijingshan District, Beijing, People's Republic of China.
Xiao-Lei Huang
Ge-Xia Qiao

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Insect mitochondrial genomes (mitogenomes) are of great interest in exploring molecular evolution, phylogenetics and population genetics. Only two mitogenomes have been previously released in the insect group Aphididae, which consists of about 5,000 known species including some agricultural, forestry and horticultural pests. Here we report the complete 16,317 bp mitogenome of Cavariella salicicola and two nearly complete mitogenomes of Aphis glycines and Pterocomma pilosum. We also present a first comparative analysis of mitochondrial genomes of aphids. Results showed that aphid mitogenomes share conserved genomic organization, nucleotide and amino acid composition, and codon usage features. All 37 genes usually present in animal mitogenomes were sequenced and annotated. The analysis of gene evolutionary rate revealed the lowest and highest rates for COI and ATP8, respectively. A unique repeat region exclusively in aphid mitogenomes, which included variable numbers of tandem repeats in a lineage-specific manner, was highlighted for the first time. This region may have a function as another origin of replication. Phylogenetic reconstructions based on protein-coding genes and the stem-loop structures of control regions confirmed a sister relationship between Cavariella and pterocommatines. Current evidence suggest that pterocommatines could be formally transferred into Macrosiphini. Our paper also offers methodological instructions for obtaining other Aphididae mitochondrial genomes.

Indexed as

Genome, MitochondrialPhylogenyAnimalsAphidsBase CompositionEvolution, MolecularGene OrderMolecular Sequence DataNucleic Acid ConformationOpen Reading FramesRegulatory Sequences, Nucleic AcidRepetitive Sequences, Nucleic AcidRNA, RibosomalRNA, TransferRNA, RibosomalRNA, Transfer

Identifiers

PMID24147014
PMCPMC3798312

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.