Evidence map›Paper›PMID 24146814›Full record

ArticlePloS one2013

Detection of Salmonella spp. using a generic and differential FRET-PCR.

Jilei Zhang, Lanjing Wei, Patrick Kelly, Mark Freeman, Kirsten Jaegerson, Jiansen Gong, Bu Xu, Zhiming Pan, Chuanling Xu, Chengming Wang

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Non-TyphoidalInfection and drug resistance · 2023
    Article
  3. Article
  4. First molecular detection ofOpen veterinary journal · 2020
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jilei ZhangYangzhou University College of Veterinary Medicine, Yangzhou, Jiangsu, P. R. China ; Jiangsu Co-Innovation Center for the Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou, Jiangsu, P. R. China.
Lanjing Wei
Patrick Kelly
Mark Freeman
Kirsten Jaegerson
Jiansen Gong
Bu Xu
Zhiming Pan
Chuanling Xu
Chengming Wang

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To facilitate the detection of Salmonella and to be able to rapidly and conveniently determine the species/subspecies present, we developed and tested a generic and differential FRET-PCR targeting their tetrathionate reductase response regulator gene. The differential pan-Salmonella FRET-PCR we developed successfully detected seven plasmids that contained partial sequences of S. bongori and the six S. enterica subspecies. The detection limit varied from ~5 copies of target gene/per PCR reaction for S. enterica enterica to ~200 for S. bongori. Melting curve analysis demonstrated a T m of ~68 °C for S. enterica enterica, ~62.5 °C for S. enterica houtenae and S. enterica diarizonae, ~57 °C for S. enterica indica, and ~54 °C for S. bongori, S. enterica salamae and S. enterica arizonae. The differential pan-Salmonella FRET-PCR also detected and determined the subspecies of 4 reference strains and 47 Salmonella isolated from clinically ill birds or pigs. Finally, we found it could directly detect and differentiate Salmonella in feline (5/50 positive; 10%; one S. enterica salamae and 4 S. enterica enterica) and canine feces (15/114 positive; 13.2%; all S. enterica enterica). The differential pan-Salmonella FRET-PCR failed to react with 96 non-Salmonella bacterial strains. Our experiments show the differential pan-Salmonella FRET-PCR we developed is a rapid, sensitive and specific method to detect and differentiate Salmonella.

Indexed as

AnimalsBacterial ProteinsBacterial Typing TechniquesCatsDNA, BacterialDogsFecesFluorescence Resonance Energy TransferLimit of DetectionNucleic Acid DenaturationOxidoreductasesPlasmidsPolymerase Chain ReactionPoultrySalmonellaSalmonella Infections, AnimalBacterial ProteinsDNA, BacterialOxidoreductasestetrathionate reductase

Identifiers

PMID24146814
PMCPMC3797804

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.