Evidence map›Paper›PMID 24146222›Full record

ArticlePlant molecular biology2014

Characterization and expression analysis of SOMATIC EMBRYOGENESIS RECEPTOR KINASE (SERK) genes in sexual and apomictic Paspalum notatum.

Maricel Podio, Silvina Andrea Felitti, Lorena Adelina Siena, Luciana Delgado, Micaela Mancini, José Guillermo Seijo, Ana María González, Silvina Claudia Pessino, Juan Pablo A Ortiz

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Article in Plant molecular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
8.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Review
  3. Effects of genotype and culture conditions on microspore embryogenesis in radish (Molecular breeding : new strategies in plant improvement · 2022
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  4. Spotting the Targets of the Apospory ControllerPlants (Basel, Switzerland) · 2022
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  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. The Rise of Apomixis in Natural Plant Populations.Frontiers in plant science · 2019
    Review
  15. A Plant-SpecificFrontiers in plant science · 2019
    Article
  16. Article
  17. Article
  18. Article
  19. The MAP3K-CodingFrontiers in plant science · 2018
    Article
  20. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Maricel PodioLaboratorio de Biología Molecular, Facultad de Ciencias Agrarias, Universidad Nacional de Rosario (UNR), Campo Experimental Villarino, CC 14 (S2125ZAA), Zavalla, Santa Fe, Argentina.
Silvina Andrea Felitti
Lorena Adelina Siena
Luciana Delgado
Micaela Mancini
José Guillermo Seijo
Ana María González
Silvina Claudia Pessino
Juan Pablo A Ortiz
Instituto de Investigaciones en Ciencias Agrarias de Rosario · ARCentro Científico Tecnológico - Nordeste · ARConsejo Nacional de Investigaciones Científicas y Técnicas · ARNational University of Rosario · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE (SERK) gene plays a fundamental role in somatic embryogenesis of angiosperms, and is associated with apomixis in Poa pratensis. The objective of this work was to isolate, characterize and analyze the expression patterns of SERK genes in apomictic and sexual genotypes of Paspalum notatum. A conserved 200-bp gene fragment was amplified from genomic DNA with heterologous primers, and used to initiate a chromosomal walking strategy for cloning the complete sequence. This procedure allowed the isolation of two members of the P. notatum SERK family; PnSERK1, which is similar to PpSERK1, and PnSERK2, which is similar to ZmSERK2 and AtSERK1. Phylogenetic analyses indicated that PnSERK1 and PnSERK2 represent paralogous sequences. Southern-blot hybridization indicated the presence of at least three copies of SERK genes in the species. qRT-PCR analyses revealed that PnSERK2 was expressed at significantly higher levels than PnSERK1 in roots, leaves, reproductive tissues and embryogenic calli. Moreover, in situ hybridization experiments revealed that PnSERK2 displayed a spatially and chronologically altered expression pattern in reproductive organs of the apomictic genotype with respect to the sexual one. PnSERK2 is expressed in nucellar cells of the apomictic genotype at meiosis, but only in the megaspore mother cell in the sexual genotype. Therefore, apomixis onset in P. notatum seems to be correlated with the expression of PnSERK2 in nucellar tissue.

Indexed as

Gene Expression Regulation, PlantAmino Acid SequenceApomixisGene Expression ProfilingGenotypeIn Situ HybridizationIsoenzymesMolecular Sequence DataPaspalumPhylogenyPlant ProteinsProtein KinasesReverse Transcriptase Polymerase Chain ReactionSeedsSequence Homology, Amino AcidIsoenzymesPlant ProteinsProtein Kinases

Identifiers

PMID24146222
OpenAlexW2030611529

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.