Evidence map›Paper›PMID 24145419›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Genome duplication and mutations in ACE2 cause multicellular, fast-sedimenting phenotypes in evolved Saccharomyces cerevisiae.

Bart Oud, Victor Guadalupe-Medina, Jurgen F Nijkamp, Dick de Ridder, Jack T Pronk, Antonius J A van Maris, Jean-Marc Daran

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Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

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52citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

  1. Review
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  6. Adaptive Laboratory Evolution of Pichia pastoris by Serial Batch Cultivation.Methods in molecular biology (Clifton, N.J.) · 2026
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  9. Review
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

7 authors.

Bart OudDepartment of Biotechnology, Delft University of Technology, 2628 BC, Delft, The Netherlands.
Victor Guadalupe-Medina
Jurgen F Nijkamp
Dick de Ridder
Jack T Pronk
Antonius J A van Maris
Jean-Marc Daran

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Laboratory evolution of the yeast Saccharomyces cerevisiae in bioreactor batch cultures yielded variants that grow as multicellular, fast-sedimenting clusters. Knowledge of the molecular basis of this phenomenon may contribute to the understanding of natural evolution of multicellularity and to manipulating cell sedimentation in laboratory and industrial applications of S. cerevisiae. Multicellular, fast-sedimenting lineages obtained from a haploid S. cerevisiae strain in two independent evolution experiments were analyzed by whole genome resequencing. The two evolved cell lines showed different frameshift mutations in a stretch of eight adenosines in ACE2, which encodes a transcriptional regulator involved in cell cycle control and mother-daughter cell separation. Introduction of the two ace2 mutant alleles into the haploid parental strain led to slow-sedimenting cell clusters that consisted of just a few cells, thus representing only a partial reconstruction of the evolved phenotype. In addition to single-nucleotide mutations, a whole-genome duplication event had occurred in both evolved multicellular strains. Construction of a diploid reference strain with two mutant ace2 alleles led to complete reconstruction of the multicellular-fast sedimenting phenotype. This study shows that whole-genome duplication and a frameshift mutation in ACE2 are sufficient to generate a fast-sedimenting, multicellular phenotype in S. cerevisiae. The nature of the ace2 mutations and their occurrence in two independent evolution experiments encompassing fewer than 500 generations of selective growth suggest that switching between unicellular and multicellular phenotypes may be relevant for competitiveness of S. cerevisiae in natural environments.

Indexed as

Directed Molecular EvolutionPhenotypeBenzenesulfonatesChitinasesDNA-Binding ProteinsFlow CytometryFrameshift MutationGene DuplicationGenetic EngineeringReverse Transcriptase Polymerase Chain ReactionSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence Analysis, DNATranscription FactorsACE2 protein, S cerevisiaeBenzenesulfonatesChitinasesC.I. Fluorescent Brightening Agent 28DNA-Binding ProteinsSaccharomyces cerevisiae ProteinsTranscription Factorsreverse engineeringwhole genome sequencing

Identifiers

PMID24145419
PMCPMC3831460

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.