Evidence map›Paper›PMID 24145399›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Rapidly evolving R genes in diverse grass species confer resistance to rice blast disease.

Sihai Yang, Jing Li, Xiaohui Zhang, Qijun Zhang, Ju Huang, Jian-Qun Chen, Daniel L Hartl, Dacheng Tian

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 135 citations in OpenAlex.

  1. Article
  2. Evolutionary histories of functional mutations during the domestication and spread ofProceedings of the National Academy of Sciences of the United States of America · 2025
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  7. Structure-Function Characterisation of Eop1 Effectors from theInternational journal of molecular sciences · 2023
    Article
  8. Review
  9. Article
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  11. AnInternational journal of molecular sciences · 2023
    Article
  12. Review
  13. Article
  14. Review
  15. Development and Characterization ofFrontiers in plant science · 2022
    Article
  16. Article
  17. Identification and Cloning of a CC-NBS-NBS-LRR Gene as a Candidate ofInternational journal of molecular sciences · 2021
    Article
  18. Article
  19. Article
  20. Review

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Sihai YangState Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing 210093, China.
Jing Li
Xiaohui Zhang
Qijun Zhang
Ju Huang
Jian-Qun Chen
Daniel L Hartl
Dacheng Tian
Nanjing University · CNHarvard University · USJiangsu Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We show that the genomes of maize, sorghum, and brachypodium contain genes that, when transformed into rice, confer resistance to rice blast disease. The genes are resistance genes (R genes) that encode proteins with nucleotide-binding site (NBS) and leucine-rich repeat (LRR) domains (NBS-LRR proteins). By using criteria associated with rapid molecular evolution, we identified three rapidly evolving R-gene families in these species as well as in rice, and transformed a randomly chosen subset of these genes into rice strains known to be sensitive to rice blast disease caused by the fungus Magnaporthe oryzae. The transformed strains were then tested for sensitivity or resistance to 12 diverse strains of M. oryzae. A total of 15 functional blast R genes were identified among 60 NBS-LRR genes cloned from maize, sorghum, and brachypodium; and 13 blast R genes were obtained from 20 NBS-LRR paralogs in rice. These results show that abundant blast R genes occur not only within species but also among species, and that the R genes in the same rapidly evolving gene family can exhibit an effector response that confers resistance to rapidly evolving fungal pathogens. Neither conventional evolutionary conservation nor conventional evolutionary convergence supplies a satisfactory explanation of our findings. We suggest a unique mechanism termed "constrained divergence," in which R genes and pathogen effectors can follow only limited evolutionary pathways to increase fitness. Our results open avenues for R-gene identification that will help to elucidate R-gene vs. effector mechanisms and may yield new sources of durable pathogen resistance.

Indexed as

Evolution, MolecularMagnaportheBase SequenceBrachypodiumChinaDisease ResistanceGenes, PlantLikelihood FunctionsModels, GeneticMolecular Sequence DataOryzaPhylogenyPlant DiseasesReal-Time Polymerase Chain ReactionSequence Analysis, DNASorghum

Identifiers

PMID24145399
PMCPMC3831948
OpenAlexW2020062916

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.