Evidence map›Paper›PMID 24145034›Full record

ArticleThe Journal of biological chemistry2013

Loop L5 assumes three distinct orientations during the ATPase cycle of the mitotic kinesin Eg5: a transient and time-resolved fluorescence study.

Joseph M Muretta, William M Behnke-Parks, Jennifer Major, Karl J Petersen, Adeline Goulet, Carolyn A Moores, David D Thomas, Steven S Rosenfeld

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Structure and comparison of the motor domain of centromere-associated protein E.Acta crystallographica. Section D, Structural biology · 2021
    Article
  8. Review
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  14. Heart failure drug changes the mechanoenzymology of the cardiac myosin powerstroke.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  15. Article
  16. The structural kinetics of switch-1 and the neck linker explain the functions of kinesin-1 and Eg5.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Joseph M MurettaFrom the Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, Minnesota 55455.
William M Behnke-Parks
Jennifer Major
Karl J Petersen
Adeline Goulet
Carolyn A Moores
David D Thomas
Steven S Rosenfeld
University of Minnesota · USCleveland Clinic · USBirkbeck, University of London · GBColumbia University · USInstitute of Structural and Molecular Biology · GB

Funding

Structural Dynamics of Muscle ContractionR01AR032961 · NIAMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI THOMAS, DAVID D · 1986 to 2018
$8.0M
Use of specific transcription factors to promote limb regeneration capacityP30AR057220 · NIAMS · UNIVERSITY OF MINNESOTA · PI KARACHUNSKI, PETER ISAAK · 2009 to 2013
$3.0M
MOLECULAR DYNAMICS OF MUSCLE CONTRACTIONR37AR032961 · NIAMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI THOMAS, DAVID DALE · 1994 to 2003
$2.1M
Mechanisms of Processivity in Molecular MotorsR01GM102875 · NIGMS · CLEVELAND CLINIC LERNER COM-CWRU · PI YI, QING · 2012 to 2015
$1.2M
Spectroscopic Probes of Smooth Muscle Functional DynamicsF32AR056191 · NIAMS · UNIVERSITY OF MINNESOTA · PI MURETTA, JOSEPH M. · 2008 to 2010
$145k
Biotechnology and Biological Sciences Research Council BB/H005137/1NIAMS NIH HHS AR032961NIAMS NIH HHS AR056191NIAMS NIH HHS AR057220NIAMS NIH HHS F32 AR056191NIAMS NIH HHS P30 AR057220NIAMS NIH HHS R01 AR032961NIAMS NIH HHS R37 AR032961NIGMS NIH HHS GM102875NIGMS NIH HHS R01 GM102875
6 · The paper itself

Abstract

Members of the kinesin superfamily of molecular motors differ in several key structural domains, which probably allows these molecular motors to serve the different physiologies required of them. One of the most variable of these is a stem-loop motif referred to as L5. This loop is longest in the mitotic kinesin Eg5, and previous structural studies have shown that it can assume different conformations in different nucleotide states. However, enzymatic domains often consist of a mixture of conformations whose distribution shifts in response to substrate binding or product release, and this information is not available from the "static" images that structural studies provide. We have addressed this issue in the case of Eg5 by attaching a fluorescent probe to L5 and examining its fluorescence, using both steady state and time-resolved methods. This reveals that L5 assumes an equilibrium mixture of three orientations that differ in their local environment and segmental mobility. Combining these studies with transient state kinetics demonstrates that there is a major shift in this distribution during transitions that interconvert weak and strong microtubule binding states. Finally, in conjunction with previous cryo-EM reconstructions of Eg5·microtubule complexes, these fluorescence studies suggest a model in which L5 regulates both nucleotide and microtubule binding through a set of reversible interactions with helix α3. We propose that these features facilitate the production of sustained opposing force by Eg5, which underlies its role in supporting formation of a bipolar spindle in mitosis.

Indexed as

Adenosine TriphosphatasesAdenylyl ImidodiphosphateBinding SitesHumansHydrophobic and Hydrophilic InteractionsKinesinsKineticsMicroscopy, ElectronMicrotubulesMitosisProtein BindingProtein Structure, SecondaryProtein Structure, TertiaryAdenosine TriphosphatasesAdenylyl ImidodiphosphateKIF11 protein, humanKinesinsAnisotropy DecayCryo-EMEg5Electron Microscopy (EM)FluorescenceKinesinKineticsMicrotubulesStopped FlowTime-resolved Fluorescence

Identifiers

PMID24145034
PMCPMC3843096
OpenAlexW2081447681

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.