Evidence map›Paper›PMID 24144980›Full record

ArticleMolecular and cellular biology2013

Cdyl, a new partner of the inactive X chromosome and potential reader of H3K27me3 and H3K9me2.

M Escamilla-Del-Arenal, S T da Rocha, C G Spruijt, O Masui, O Renaud, Arne H Smits, R Margueron, M Vermeulen, E Heard

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
7.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 73 citations in OpenAlex.

  1. Review
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  4. CDYL reinforces male gonadal sex determination through epigenetically repressingProceedings of the National Academy of Sciences of the United States of America · 2023
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  5. Review
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  7. Gene regulation in time and space during X-chromosome inactivation.Nature reviews. Molecular cell biology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

M Escamilla-Del-ArenalMammalian Developmental Epigenetics Group, Institut Curie, CNRS UMR 3215, INSERM U934, Paris, France.
S T da Rocha
C G Spruijt
O Masui
O Renaud
Arne H Smits
R Margueron
M Vermeulen
E Heard
Centre National de la Recherche Scientifique · FRUniversity Medical Center Utrecht · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

X chromosome inactivation is a remarkable example of chromosome-wide gene silencing and facultative heterochromatin formation. Numerous histone posttranslational modifications, including H3K9me2 and H3K27me3, accompany this process, although our understanding of the enzymes that lay down these marks and the factors that bind to them is still incomplete. Here we identify Cdyl, a chromodomain-containing transcriptional corepressor, as a new chromatin-associated protein partner of the inactive X chromosome (Xi). Using mouse embryonic stem cell lines with mutated histone methyltransferase activities, we show that Cdyl relies on H3K9me2 for its general association with chromatin in vivo. For its association with Xi, Cdyl requires the process of differentiation and the presence of H3K9me2 and H3K27me3, which both become chromosomally enriched following Xist RNA coating. We further show that the removal of the PRC2 component Eed and subsequent loss of H3K27me3 lead to a reduction of both Cdyl and H3K9me2 enrichment on inactive Xi. Finally, we show that Cdyl associates with the H3K9 histone methyltransferase G9a and the MGA protein, both of which are also found on Xi. We propose that the combination of H3K9me2 and H3K27me3 recruits Cdyl to Xi, and this, in turn, may facilitate propagation of the H3K9me2 mark by anchoring G9a.

Indexed as

X Chromosome InactivationAnimalsCell DifferentiationCell NucleusCo-Repressor ProteinsEmbryonic Stem CellsEpigenesis, GeneticFemaleGene Expression Regulation, DevelopmentalHEK293 CellsHistone AcetyltransferasesHistone-Lysine N-MethyltransferaseHistonesHumansHydro-LyasesMethylationCbx7 protein, mouseCdyl protein, mouseCo-Repressor ProteinsG9a protein, mouseHistone AcetyltransferasesHistone-Lysine N-MethyltransferaseHistonesHydro-LyasesPolycomb Repressive Complex 1Protein IsoformsProteinsTretinoin

Identifiers

PMID24144980
PMCPMC3889549
OpenAlexW2099069972

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.