Evidence map›Paper›PMID 24144541›Full record

ArticleBiochimica et biophysica acta2014

Investigating the interaction between peptides of the amphipathic helix of Hcf106 and the phospholipid bilayer by solid-state NMR spectroscopy.

Lei Zhang, Lishan Liu, Sergey Maltsev, Gary A Lorigan, Carole Dabney-Smith

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Purification and membrane interactions of human KCNQ1Biochimica et biophysica acta. Biomembranes · 2022
    Article
  2. Review
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Lei ZhangDepartment of Chemistry and Biochemistry, Miami University, Oxford, OH 45056, USA.
Lishan Liu
Sergey Maltsev
Gary A Lorigan
Carole Dabney-Smith

Funding

EPR and Solid-State NMR Studies of Integral Membrane ProteinsR01GM080542 · NIGMS · MIAMI UNIVERSITY OXFORD · PI LORIGAN, GARY A · 2007 to 2011
$1.6M
EPR Structural Studies of KCNE1/KCNQ1R01GM108026 · NIGMS · MIAMI UNIVERSITY OXFORD · PI LORIGAN, GARY A · 2013 to 2016
$1.3M
NIGMS NIH HHS GM080542ZNIGMS NIH HHS R01 GM080542NIGMS NIH HHS R01GM080542NIGMS NIH HHS R01 GM108026
6 · The paper itself

Abstract

The chloroplast twin arginine translocation (cpTat) system transports highly folded precursor proteins into the thylakoid lumen using the protonmotive force as its only energy source. Hcf106, as one of the core components of the cpTat system, is part of the precursor receptor complex and functions in the initial precursor-binding step. Hcf106 is predicted to contain a single amino terminal transmembrane domain followed by a Pro-Gly hinge, a predicted amphipathic α-helix (APH), and a loosely structured carboxy terminus. Hcf106 has been shown biochemically to insert spontaneously into thylakoid membranes. To better understand the membrane active capabilities of Hcf106, we used solid-state NMR spectroscopy to investigate those properties of the APH. In this study, synthesized peptides of the predicted Hcf106 APH (amino acids 28-65) were incorporated at increasing mol.% into 1-palmitoyl-2-oleoyl-sn-glycero-phosphocholine (POPC) and POPC/MGDG (monogalactosyldiacylglycerol; mole ratio 85:15) multilamellar vesicles (MLVs) to probe the peptide-lipid interaction. Solid-state (31)P NMR and (2)H NMR spectroscopic experiments revealed that the peptide perturbs the headgroup and the acyl chain regions of phospholipids as indicated by changes in spectral lineshape, chemical shift anisotropy (CSA) line width, and (2)H order SCD parameters. In addition, the comparison between POPC MLVs and POPC/MGDG MLVs indicated that the lipid bilayer composition affected peptide perturbation of the lipids, and such perturbation appeared to be more intense in a system more closely mimicking a thylakoid membrane.

Indexed as

Amino Acid SequenceGalactolipidsLipid BilayersMagnetic Resonance SpectroscopyMembrane ProteinsModels, BiologicalMolecular Sequence DataPeptidesPhosphatidylcholinesPlant ProteinsProtein Structure, SecondaryProtein Structure, TertiaryThylakoids1-palmitoyl-2-oleoylphosphatidylcholineGalactolipidsHcf106 protein, plantLipid BilayersMembrane ProteinsmonogalactosyldiacylglycerolPeptidesPhosphatidylcholinesPlant Proteins1-palmitoyl-2-oleoyl-sn-glycero-phosphocholineAmphipathic helixamphipathic α-helixAPHchemical shift anisotropyChloroplast TatBchloroplast twin arginine transportcpTatCSAMembrane active peptideMGDGMLVmonogalactosyl diacylglycerolmultilamellar vesiclesPOPCS(CD)segmental C–D bond order parameterTMDtransmembrane domainTwin arginine transport

Identifiers

PMID24144541
PMCPMC3864105

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.