Evidence map›Paper›PMID 24143233›Full record

ArticlePloS one2013

Activation associated ERK1/2 signaling impairments in CD8+ T cells co-localize with blunted polyclonal and HIV-1 specific effector functions in early untreated HIV-1 infection.

Timothy Q Crawford, Fredrick M Hecht, Christopher D Pilcher, Lishomwa C Ndhlovu, Jason D Barbour

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02563509 (Reconstitution of HIV-specific Immunity Against HIV), which is not on this map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02563509 phase1completednot on this mapstarted 2016, after this paper: background citation

Reconstitution of HIV-specific Immunity Against HIV

TypeinterventionalSponsorGuangzhou 8th People's HospitalRan2016 to 2017Enrolled30ConditionsHIVArmsHIV-specific CD8 cells
3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Transcriptional Regulation of CXCL5 in HIV-1-Infected Macrophages and Its Functional Consequences on CNS Pathology.Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research · 2015
    Article
  6. Concomitant evaluation of PMA+ionomycin-induced kinase phosphorylation and cytokine production in T cell subsets by flow cytometry.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2014
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Timothy Q CrawfordHawaii Center for HIV/AIDS, John A. Burns School of Medicine, Department of Tropical Medicine, Medical Microbiology and Pharmacology, University of Hawaii at Manoa, Honolulu, Hawaii, United States of America.
Fredrick M Hecht
Christopher D Pilcher
Lishomwa C Ndhlovu
Jason D Barbour
University of Hawaiʻi at Mānoa · USSan Francisco General Hospital · US

Funding

Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STEVEN Grant DEEKS · 1988 to 2026
$93.6M
Transmission and Persistence of CTL and Drug Resistance MutationsP01AI071713 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HECHT, FREDERICK M · 2007 to 2011
$14.3M
Mentoring and Research in Integrative MedicineK24AT007827 · NCCIH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HECHT, FREDERICK M · 2013 to 2022
$1.8M
Bioinformatic Mapping of HIV-1 Nef Manipulation of T-Cell Activation and FunctionR21AI076014 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BARBOUR, JASON DAVID · 2007 to 2008
$421k
Modulating Tim-3 to control HIV infectionR56AI083112 · NIAID · UNIVERSITY OF HAWAII AT MANOA · PI NDHLOVU, LISHOMWA C · 2010 to 2010
$377k
NCCIH NIH HHS K24 AT007827NIAID NIH HHS P01 AI071713NIAID NIH HHS P30 AI027763NIAID NIH HHS R21 AI076014NIAID NIH HHS R56 AI083112
6 · The paper itself

Abstract

We recently observed that a large proportion of activated (CD38(+)HLA-DR(+)) CD8(+) T cells from recently HIV-1-infected adults are refractory to phosphorylation of ERK1/2 kinases (p-ERK1/2-refractory). Given that the ERK1/2 pathway mediates intracellular signaling critical for multiple T cell functions, including key effector functions, the loss of ERK1/2 responsiveness may have broad consequences for CD8(+) T cell function. In the current study, we hypothesized that the p-ERK1/2-refractory population, localized largely within the activated CD38(+)HLA-DR(+) CD8(+) T cell population, would display impairments in CD8(+) T cell effector functions, such as cytokine production and degranulation, compared to CD8(+) p-ERK1/2-responsive cells. We further hypothesized that the p-ERK1/2-refractory phenotype is persistent over time during untreated infection, and would correlate with poorer virologic control, in a manner independent of CD8(+) T cell activation level. We performed single-cell resolution, flow cytometric assays of phospho-kinase responses paired to intracellular cytokine staining in one assay to examine IFN-γ, perforin and CD107α responses in CD8(+) T cells by ERK1/2 signaling profile. On a per cell basis, p-ERK1/2-refractory cells, which fall predominantly within the activated CD8(+) T cell compartment, produced less IFN-γ in response to polyclonal or HIV-1 antigen-specific stimulation, and expressed lower levels of perforin and CD107α. The p-ERK1/2 refractory cell population displayed minimal overlap with the PD-1 and Tim-3 inhibitory exhaustion markers and predicted high viral load independent of activation, suggesting that ERK1/2 may be a unique marker and point of intervention for improving CD8(+) T cell function. Blunted effector functions, secondary to ERK1/2 signaling deficits concentrated within activated CD8(+) T cells, may contribute to immunodeficiency and underlie the predictive capacity of CD8(+) T cell activation on HIV-1 disease progression. (270/300).

Indexed as

Adaptive ImmunityAdultAnti-HIV AgentsCD8-Positive T-LymphocytesEnzyme Activationgag Gene Products, Human Immunodeficiency VirusHIV-1HIV InfectionsHumansInterferon-gammaMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 3PhenotypePhosphoproteinsSignal TransductionSpecies SpecificityAnti-HIV Agentsgag Gene Products, Human Immunodeficiency VirusInterferon-gammaMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 3Phosphoproteins

Identifiers

PMID24143233
PMCPMC3797111
OpenAlexW1990582794

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.