Evidence map›Paper›PMID 24142700›Full record

ArticleThe Journal of biological chemistry2013

Co-translational processing of glycoprotein 3 from equine arteritis virus: N-glycosylation adjacent to the signal peptide prevents cleavage.

Anna Karolina Matczuk, Dusan Kunec, Michael Veit

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Anna Karolina MatczukFrom the Institut für Virologie, Free University Berlin, 14163 Berlin, Germany.
Dusan Kunec
Michael Veit

Funding

A systems approach to metabolic dysregulation in the heartK08HL107451 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JAIN, MOHIT · 2011 to 2015
$685k
NHLBI NIH HHS 5K08HL107451
6 · The paper itself

Abstract

Signal peptide cleavage and N-glycosylation of proteins are co-translational processes, but little is known about their interplay if they compete for adjacent sites. Here we report two unique findings for processing of glycoprotein 3 of equine arteritis virus. Glycoprotein 3 (Gp3) contains an N-terminal signal peptide, which is not removed, although bioinformatics predicts cleavage with high probability. There is an overlapping sequon, NNTT, adjacent to the signal peptide that we show to be glycosylated at both asparagines. Exchanging the overlapping sequon and blocking glycosylation allows signal peptide cleavage, indicating that carbohydrate attachment inhibits processing of a potentially cleavable signal peptide. Bioinformatics analyses suggest that a similar processing scheme may exist for some cellular proteins. Membrane fractionation and secretion experiments revealed that the signal peptide of Gp3 does not act as a membrane anchor, indicating that it is completely translocated into the lumen of the endoplasmic reticulum. Membrane attachment is caused by the hydrophobic C terminus of Gp3, which, however, does not span the membrane but rather attaches the protein peripherally to endoplasmic reticulum membranes.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionAnimalsAsparagineBinding SitesCHO CellsComputational BiologyCricetulusEndoplasmic ReticulumEquartevirusGlycosylationHorsesHumansMolecular Sequence DataMutagenesis, Site-DirectedProtein Modification, TranslationalAsparagineGP3 protein, equine arteritis virusProtein Sorting SignalsRecombinant ProteinsViral Envelope ProteinsArterivirusEndoplasmic Reticulum (ER)GlycosylationGp3N-GlycosylationProtein TranslocationSignal PeptidaseSignal Peptide CleavageVirology

Identifiers

PMID24142700
PMCPMC3853287

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.