Evidence map›Paper›PMID 24141705›Full record

ArticleNature structural & molecular biology2013

Mechanism of allosteric activation of SAMHD1 by dGTP.

Xiaoyun Ji, Ying Wu, Junpeng Yan, Jennifer Mehrens, Haitao Yang, Maria DeLucia, Caili Hao, Angela M Gronenborn, Jacek Skowronski, Jinwoo Ahn and 1 more

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed.

  1. Targeting IMPDH to inhibit SAMHD1 inCell cycle (Georgetown, Tex.) · 2026
    Article
  2. Article
  3. Review
  4. Transition metal activation reframes SAMHD1 regulation.bioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xiaoyun Ji1] Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut, USA. [2].
Ying Wu
Junpeng Yan
Jennifer Mehrens
Haitao Yang
Maria DeLucia
Caili Hao
Angela M Gronenborn
Jacek Skowronski
Jinwoo Ahn
Yong Xiong

Funding

X-Ray Core P50GM082251 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CALERO, GUILLERMO ALBERTO · 2007 to 2018
$48.1M
Restriction of HIV infection by SAMHD1 proteinR01AI100673 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI SKOWRONSKI, JACEK · 2012 to 2016
$2.5M
Mechanisms of enveloped virus tethering by tetherin and viral countermeasuresR01AI097064 · NIAID · YALE UNIVERSITY · PI XIONG, YONG · 2011 to 2015
$2.0M
NIAID NIH HHS AI097064NIAID NIH HHS AI100673NIAID NIH HHS R01 AI097064NIAID NIH HHS R01 AI100673NIGMS NIH HHS P50 GM082251NIGMS NIH HHS P50GM82251
6 · The paper itself

Abstract

SAMHD1, a dNTP triphosphohydrolase (dNTPase), has a key role in human innate immunity. It inhibits infection of blood cells by retroviruses, including HIV, and prevents the development of the autoinflammatory Aicardi-Goutières syndrome (AGS). The inactive apo-SAMHD1 interconverts between monomers and dimers, and in the presence of dGTP the protein assembles into catalytically active tetramers. Here, we present the crystal structure of the human tetrameric SAMHD1-dGTP complex. The structure reveals an elegant allosteric mechanism of activation through dGTP-induced tetramerization of two inactive dimers. Binding of dGTP to four allosteric sites promotes tetramerization and induces a conformational change in the substrate-binding pocket to yield the catalytically active enzyme. Structure-based biochemical and cell-based biological assays confirmed the proposed mechanism. The SAMHD1 tetramer structure provides the basis for a mechanistic understanding of its function in HIV restriction and the pathogenesis of AGS.

Indexed as

Allosteric RegulationProtein MultimerizationBinding SitesCrystallography, X-RayDeoxyguanine NucleotidesHumansModels, MolecularMonomeric GTP-Binding ProteinsProtein ConformationSAM Domain and HD Domain-Containing Protein 1Deoxyguanine Nucleotidesdeoxyguanosine triphosphateMonomeric GTP-Binding ProteinsSAM Domain and HD Domain-Containing Protein 1SAMHD1 protein, human

Identifiers

PMID24141705
PMCPMC3833828

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.