Evidence map›Paper›PMID 24139991›Full record

ArticleStructure (London, England : 1993)2013

Asp44 stabilizes the Trp41 gate of the M2 proton channel of influenza A virus.

Chunlong Ma, Giacomo Fiorin, Vincenzo Carnevale, Jun Wang, Robert A Lamb, Michael L Klein, Yibing Wu, Lawrence H Pinto, William F DeGrado

Abstract read
In one paragraph

Article in Structure (London, England : 1993), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Activation of the influenza B M2 proton channel (BM2).bioRxiv : the preprint server for biology · 2024
    Article
  5. Article
  6. Article
  7. Spiers Memorial Lecture: Analysis andFaraday discussions · 2021
    Article
  8. Review
  9. Article
  10. Review
  11. M2 amphipathic helices facilitate pH-dependent conformational transition in influenza A virus.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Chunlong MaDepartment of Neurobiology, Northwestern University, Evanston, IL 60208-3500, USA; Department of Molecular Biosciences, Northwestern University, Evanston, IL 60208-3500, USA.
Giacomo Fiorin
Vincenzo Carnevale
Jun Wang
Robert A Lamb
Michael L Klein
Yibing Wu
Lawrence H Pinto
William F DeGrado

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
Development of drugs that target the M2 proton channel from the influenza A VirusU01AI074571 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI DEGRADO, WILLIAM · 2008 to 2012
$7.5M
Structure of M2 Proton Channel from Influenza A VirusR01GM056423 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI DEGRADO, WILLIAM · 1997 to 2016
$4.5M
The Structure and Function of the Influenza Virus GenomeR01AI020201 · NIAID · NORTHWESTERN UNIVERSITY · PI LAMB, ROBERT A · 1985 to 2016
$2.8M
NCI NIH HHS P30 CA060553NIAID NIH HHS AI-R01-20101NIAID NIH HHS AI-U01-074571NIAID NIH HHS R01 AI020201NIGMS NIH HHS R01 GM056423
6 · The paper itself

Abstract

Channel gating and proton conductance of the influenza A virus M2 channel result from complex pH-dependent interactions involving the pore-lining residues His37, Trp41, and Asp44. Protons diffusing from the outside of the virus protonate His37, which opens the Trp41 gate and allows one or more protons to move into the virus interior. The Trp41 gate gives rise to a strong asymmetry in the conductance, favoring rapid proton flux only when the outside is at acid pH. Here, we show that the proton currents recorded for mutants of Asp44, including D44N found in the A/FPV/Rostock/34 strain, lose this asymmetry. Moreover, NMR and MD simulations show that the mutations induce a conformational change similar to that induced by protonation of His37 at low pH, and decrease the structural stability of the hydrophobic seal associated with the Trp41 gate. Thus, Asp44 is able to determine two important properties of the M2 proton channel.

Indexed as

Influenza A virusAmino Acid MotifsAmino Acid SequenceAmino Acid SubstitutionAnimalsAspartic AcidCells, CulturedHydrogen-Ion ConcentrationMembrane PotentialsMolecular Dynamics SimulationMolecular Sequence DataNuclear Magnetic Resonance, BiomolecularOocytesPatch-Clamp TechniquesProtein StabilityProtein Structure, TertiaryAspartic AcidM2 protein, Influenza A virusTryptophanViral Matrix ProteinsViroporin Proteins

Identifiers

PMID24139991
PMCPMC3927992

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.