Evidence map›Paper›PMID 24138069›Full record

ArticleOmics : a journal of integrative biology2013

Integrative omics approach identifies interleukin-16 as a biomarker of emphysema.

Russell P Bowler, Timothy M Bahr, Grant Hughes, Sharon Lutz, Yu-Il Kim, Christopher D Coldren, Nichole Reisdorph, Katerina J Kechris

Open access · greenAbstract read
In one paragraph

Article in Omics : a journal of integrative biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  7. The role of IL‑16 gene polymorphisms in endometriosis.International journal of molecular medicine · 2018
    Article
  8. Paradigms in chronic obstructive pulmonary disease: phenotypes, immunobiology, and therapy with a focus on vascular disease.Journal of investigative medicine : the official publication of the American Federation for Clinical Research · 2017
    Review
  9. Article
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  12. Review
  13. Factors associated with plasma IL-33 levels in patients with chronic obstructive pulmonary disease.International journal of chronic obstructive pulmonary disease · 2017
    Article
  14. Article
  15. Review
  16. Interleukin-16-producing NK cells and T-cells in the blood of tobacco smokers with and without COPD.International journal of chronic obstructive pulmonary disease · 2016
    Article
  17. Article
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  19. Review
  20. Integrative genomics of chronic obstructive pulmonary disease.Biochemical and biophysical research communications · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Russell P Bowler1 Department of Medicine, National Jewish Health , Denver, Colorado.
Timothy M Bahr
Grant Hughes
Sharon Lutz
Yu-Il Kim
Christopher D Coldren
Nichole Reisdorph
Katerina J Kechris
Colorado School of Public Health · USUniversity of Colorado Denver · USChonnam National University Hospital · KRNational Jewish Health · USVanderbilt University Medical Center · US

Funding

Genetic Epidemiology of COPDU01HL089897 · NHLBI · NATIONAL JEWISH HEALTH · PI CRAPO, JAMES D · 2007 to 2021
$56.9M
Colorado Clinical and Translational Sciences InstituteUL1TR001082 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2013 to 2017
$48.0M
Metabolomic signatures of empysema and COPD progression in the COPDGene cohortR01HL089897 · NHLBI · NATIONAL JEWISH HEALTH · PI CRAPO, JAMES D · 2012 to 2016
$31.1M
Genetic Epidemiology of COPDU01HL089856 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI SILVERMAN, EDWIN K · 2007 to 2021
$20.7M
(2 of 2) Genetic Epidemiology of COPDR01HL089856 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI SILVERMAN, EDWIN K · 2012 to 2016
$18.9M
Metabolic profiles of COPD phenotypesP20HL113445 · NHLBI · NATIONAL JEWISH HEALTH · PI BOWLER, RUSSELL PAUL · 2012 to 2016
$4.7M
Sphingolipids and inflammatory biomarkers of COPD progression in healthy smokersR01HL129937 · NHLBI · NATIONAL JEWISH HEALTH · PI BOWLER, RUSSELL PAUL · 2015 to 2017
$1.3M
NCATS NIH HHS UL1 TR001082NHLBI NIH HHS P20 HL113445NHLBI NIH HHS R01 HL089856NHLBI NIH HHS R01 HL 08 9897NHLBI NIH HHS R01 HL089897NHLBI NIH HHS R01 HL 09 543NHLBI NIH HHS R01 HL129937NHLBI NIH HHS U01 HL089856NHLBI NIH HHS U01 HL089897
6 · The paper itself

Abstract

Interleukin-16 (IL-16) is a multifunctional cytokine that has been associated with autoimmune and allergic diseases. To investigate comprehensively whether IL-16 is also associated with chronic obstructive pulmonary disease (COPD) and emphysema, we performed an integrated analysis of multiple "omics" data. Over 500 subjects participating in the COPDGene® study donated blood and were clinically characterized and genetically profiled. IL-16 mRNA levels were measured in peripheral blood mononuclear cells (PBMC), and protein levels were measured in fresh frozen plasma. A multivariate analysis found plasma IL-16 positively associated with age and body mass index, and negatively associated with current smoking and emphysema in the upper lobes. PBMC IL-16 expression was positively associated with gender and a composite score for airflow obstruction, emphysema, and gas trapping. Whole-genome expression quantitative trait locus (eQTL) analysis identified a novel IL-16 missense SNP (rs11556218) associated with lower IL-16 in plasma. In summary, an integrated "omics" analysis in a very large cohort identified an association between decreased IL-16 and emphysema and discovered a novel IL-16 cis-eQTL. Thus IL-16 plasma levels and IL-16 genotyping may be useful in a personalized medicine approach for lung disease.

Indexed as

Adrenal Cortex HormonesAgedBiomarkersEmphysemaFemaleGenetic Association StudiesGenetic Predisposition to DiseaseHumansInterleukin-16Leukocytes, MononuclearMaleMiddle AgedPhenotypePolymorphism, Single NucleotideProteomicsPulmonary Disease, Chronic ObstructiveAdrenal Cortex HormonesBiomarkersInterleukin-16

Identifiers

PMID24138069
PMCPMC3837437
OpenAlexW1999418442

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.