Evidence map›Paper›PMID 24136904›Full record

ReviewIUBMB life2013

Cyclic di-nucleotide signaling enters the eukaryote domain.

Pauline Schaap

Open access · hybridAbstract readReview
In one paragraph

Review in IUBMB life, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Review
  10. Discovery of the Second Messenger Cyclic di-GMP.Methods in molecular biology (Clifton, N.J.) · 2017
    Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Pauline SchaapCollege of Life Sciences, University of Dundee, Dundee, UK.
University of Dundee · GB

Funding

Biotechnology and Biological Sciences Research Council BB/E016308/1Wellcome Trust 090276
6 · The paper itself

Abstract

Cyclic (c-di-GMP) is the prevalent intracellular signaling intermediate in bacteria. It triggers a spectrum of responses that cause bacteria to shift from a swarming motile phase to sessile biofilm formation. However, additional functions for c-di-GMP and roles for related molecules, such as c-di-AMP and c-AMP-GMP continue to be uncovered. The first usage of cyclic-di-nucleotide (c-di-NMP) signaling in the eukaryote domain emerged only recently. In dictyostelid social amoebas, c-di-GMP is a secreted signal that induces motile amoebas to differentiate into sessile stalk cells. In humans, c-di-NMPs, which are either produced endogenously in response to foreign DNA or by invading bacterial pathogens, trigger the innate immune system by activating the expression of interferon genes. STING, the human c-di-NMP receptor, is conserved throughout metazoa and their closest unicellular relatives, suggesting protist origins for human c-di-NMP signaling. Compared to the limited number of conserved protein domains that detect the second messengers cAMP and cGMP, the domains that detect the c-di-NMPs are surprisingly varied.

Indexed as

Bacterial ProteinsBiofilmsCyclic GMPCyclic Guanosine Monophosphate-Adenosine Monophosphate SynthaseDictyosteliumDinucleoside PhosphatesHumansImmunity, InnateMembrane ProteinsNucleotides, CyclicNucleotidyltransferasesPhylogenyProtein Structure, TertiarySecond Messenger SystemsSignal TransductionSTING ProteinBacterial Proteinsbis(3',5')-cyclic diguanylic acidcGAS protein, humancyclic diadenosine phosphateCyclic GMPcyclic guanosine monophosphate-adenosine monophosphateCyclic Guanosine Monophosphate-Adenosine Monophosphate SynthaseDinucleoside PhosphatesMembrane ProteinsNucleotides, CyclicNucleotidyltransferasesSTING1 protein, humanSTING Protein2′3′-cGAMPbiofilmcGAScyclic di-AMPcyclic di-GMPdiadenylate cyclaseDictyosteliumdiguanylate cyclasestalk cell differentiationSTING

Identifiers

PMID24136904
PMCPMC3937738
OpenAlexW1555508498

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.