Evidence map›Paper›PMID 24130705›Full record

ArticlePloS one2013

Distinguishing ichthyoses by protein profiling.

Robert H Rice, Katie M Bradshaw, Blythe P Durbin-Johnson, David M Rocke, Richard A Eigenheer, Brett S Phinney, Matthias Schmuth, Robert Gruber

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. The Epidermal Transcriptome Analysis of a Novel c.639_642dupInternational journal of molecular sciences · 2023
    Article
  3. Ichthyosis vulgaris: An updated review.Skin health and disease · 2023
    Review
  4. Article
  5. Review
  6. Loricrin: Past, Present, and Future.International journal of molecular sciences · 2020
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Gene expression profiling in pachyonychia congenita skin.Journal of dermatological science · 2015
    Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Robert H RiceDepartment of Environmental Toxicology and Forensic Science Graduate Program, University of California Davis, Davis, California, United States of America.
Katie M Bradshaw
Blythe P Durbin-Johnson
David M Rocke
Richard A Eigenheer
Brett S Phinney
Matthias Schmuth
Robert Gruber
University of California, Davis · USInnsbruck Medical University · AT

Funding

Workshop on Environmental Technology Transfer and EntrepreneurshipP42ES004699 · NIEHS · UNIVERSITY OF CALIFORNIA DAVIS · PI HAMMOCK, BRUCE D · 1987 to 2021
$50.1M
UC Davis Clinical and Translational Science CenterUL1TR000002 · NCATS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BERGLUND, LARS F · 2012 to 2015
$12.2M
NCATS NIH HHS UL1TR0000002NCATS NIH HHS UL1 TR000002NIEHS NIH HHS 2P42 ES04699NIEHS NIH HHS P42 ES004699
6 · The paper itself

Abstract

To explore the usefulness of protein profiling for characterization of ichthyoses, we here determined the profile of human epidermal stratum corneum by shotgun proteomics. Samples were analyzed after collection on tape circles from six anatomic sites (forearm, palm, lower leg, forehead, abdomen, upper back), demonstrating site-specific differences in profiles. Additional samples were collected from the forearms of subjects with ichthyosis vulgaris (filaggrin (FLG) deficiency), recessive X-linked ichthyosis (steroid sulfatase (STS) deficiency) and autosomal recessive congenital ichthyosis type lamellar ichthyosis (transglutaminase 1 (TGM1) deficiency). The ichthyosis protein expression patterns were readily distinguishable from each other and from phenotypically normal epidermis. In general, the degree of departure from normal was lower from ichthyosis vulgaris than from lamellar ichthyosis, parallel to the severity of the phenotype. Analysis of samples from families with ichthyosis vulgaris and concomitant modifying gene mutations (STS deficiency, GJB2 deficiency) permitted correlation of alterations in protein profile with more complex genetic constellations.

Indexed as

AdolescentAdultAgedConnexin 26ConnexinsFemaleFilaggrin ProteinsGene Expression ProfilingHumansIchthyosisIchthyosis VulgarisMaleMiddle AgedMutationSteryl-SulfataseTransglutaminasesConnexin 26ConnexinsFilaggrin ProteinsFLG protein, humanGJB2 protein, humanSteryl-Sulfatasetransglutaminase 1Transglutaminases

Identifiers

PMID24130705
PMCPMC3793978
OpenAlexW2162688208

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.