Evidence map›Paper›PMID 24130482›Full record

Trial reportPLoS pathogens2013

Type I interferon upregulates Bak and contributes to T cell loss during human immunodeficiency virus (HIV) infection.

Joseph A Fraietta, Yvonne M Mueller, Guibin Yang, Alina C Boesteanu, Donald T Gracias, Duc H Do, Jennifer L Hope, Noshin Kathuria, Shannon E McGettigan, Mark G Lewis and 3 more

Open access · goldAbstract readClinical Trial
In one paragraph

Trial report in PLoS pathogens, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 90 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. T cell apoptosis characterizes severe Covid-19 disease.Cell death and differentiation · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Kidney international reports · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Joseph A FraiettaDepartment of Microbiology and Immunology, Center for Immunology and Vaccine Science, Drexel University College of Medicine, Philadelphia, Pennsylvania, United States of America.
Yvonne M Mueller
Guibin Yang
Alina C Boesteanu
Donald T Gracias
Duc H Do
Jennifer L Hope
Noshin Kathuria
Shannon E McGettigan
Mark G Lewis
Luis D Giavedoni
Jeffrey M Jacobson
Peter D Katsikis
Drexel University · USBioqual · USTexas Biomedical Research Institute · USUniversity of Pennsylvania · US

Funding

The Southwest National Primate Research Center Supplement- Infrastructure improvements of ABSL2 holding areasP51OD011133 · OD · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI Larry S. Schlesinger · 2012 to 2026
$129.7M
IN VITRO STIMULATION OF HIV SPECIFIC CD8+ T CELLSR01AI046719 · NIAID · UNIVERSITY OF LOUISVILLE · PI KATSIKIS, PETER D · 1999 to 2010
$2.8M
Phosphorothioate Oligonucleotides as Microbicides against HIV TransmissionR33AI082680 · NIAID · DREXEL UNIVERSITY · PI KATSIKIS, PETER D · 2012 to 2014
$1.3M
Phosphorothioate Oligonucleotides as Microbicides against HIV TransmissionR21AI082680 · NIAID · DREXEL UNIVERSITY · PI KATSIKIS, PETER D · 2010 to 2011
$414k
NIAID NIH HHS R01 AI046719NIAID NIH HHS R21 AI082680NIAID NIH HHS R33 AI082680NIH HHS P51 OD011133NIH HHS R24 OD013096
6 · The paper itself

Abstract

The role of Type I interferon (IFN) during pathogenic HIV and SIV infections remains unclear, with conflicting observations suggesting protective versus immunopathological effects. We therefore examined the effect of IFNα/β on T cell death and viremia in HIV infection. Ex vivo analysis of eight pro- and anti-apoptotic molecules in chronic HIV-1 infection revealed that pro-apoptotic Bak was increased in CD4+ T cells and correlated directly with sensitivity to CD95/Fas-mediated apoptosis and inversely with CD4+ T cell counts. Apoptosis sensitivity and Bak expression were primarily increased in effector memory T cells. Knockdown of Bak by RNA interference inhibited CD95/Fas-induced death of T cells from HIV-1-infected individuals. In HIV-1-infected patients, IFNα-stimulated gene expression correlated positively with ex vivo T cell Bak levels, CD95/Fas-mediated apoptosis and viremia and negatively with CD4+ T cell counts. In vitro IFNα/β stimulation enhanced Bak expression, CD95/Fas expression and CD95/Fas-mediated apoptosis in healthy donor T cells and induced death of HIV-specific CD8+ T cells from HIV-1-infected patients. HIV-1 in vitro sensitized T cells to CD95/Fas-induced apoptosis and this was Toll-like receptor (TLR)7/9- and Type I IFN-dependent. This sensitization by HIV-1 was due to an indirect effect on T cells, as it occurred in peripheral blood mononuclear cell cultures but not purified CD4+ T cells. Finally, peak IFNα levels and viral loads correlated negatively during acute SIV infection suggesting a potential antiviral effect, but positively during chronic SIV infection indicating that either the virus drives IFNα production or IFNα may facilitate loss of viral control. The above findings indicate stage-specific opposing effects of Type I IFNs during HIV-1 infection and suggest a novel mechanism by which these cytokines contribute to T cell depletion, dysregulation of cellular immunity and disease progression.

Indexed as

AdolescentAdultAnimalsApoptosisbcl-2 Homologous Antagonist-Killer ProteinCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesChildChild, Preschoolfas ReceptorFemaleHIV-1HIV InfectionsHumansImmunity, CellularInfantBAK1 protein, humanbcl-2 Homologous Antagonist-Killer ProteinFAS protein, humanfas ReceptorInterferon-alphaInterferon-betaTLR7 protein, humanTLR9 protein, humanToll-Like Receptor 7Toll-Like Receptor 9

Identifiers

PMID24130482
PMCPMC3795023
OpenAlexW1979386505

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.